ENSDARG00000059409


Danio rerio

Features
Gene ID: ENSDARG00000059409
  
Biological name :abcd2
  
Synonyms : abcd2 / ATP-binding cassette, sub-family D (ALD), member 2
  
Possible biological names infered from orthology : ATP binding cassette subfamily D member 2 / Q9UBJ2
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 75292781
Gene end: 75308985
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000076957
swissprot - E7F973
ZFIN ID - ZDB-GENE-050517-28
Ensembl - ENSDARG00000059409
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCD2ENSGALG00000042554Gallus gallus
 ABCD2ENSG00000173208Homo sapiens
 Abcd2ENSMUSG00000055782Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcd1 / ATP-binding cassette, sub-family D (ALD), member 1 / P33897* / P48410* / ATP binding cassette subfamily D member 1*ENSDARG0000007487660
abcd3a / ATP-binding cassette, sub-family D (ALD), member 3a / ABCD3* / P55096* / P28288* / ATP binding cassette subfamily D member 3* / ATP-binding cassette, sub-family D (ALD), member 3*ENSDARG0000010408528
abcd3b / ATP-binding cassette, sub-family D (ALD), member 3b / ABCD3* / P55096* / P28288* / ATP binding cassette subfamily D member 3* / ATP-binding cassette, sub-family D (ALD), member 3*ENSDARG0000000294727
abcd4 / ATP-binding cassette, sub-family D (ALD), member 4 / O14678* / O89016* / ATP binding cassette subfamily D member 4*ENSDARG0000006177017


Protein motifs (from Interpro)
Interpro ID Name
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR031239  ATP-binding cassette sub-family D member 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000038 very long-chain fatty acid metabolic process IEA
 biological_processGO:0006635 fatty acid beta-oxidation IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000002947 abcd3b / ATP-binding cassette, sub-family D (ALD), member 3b / ABCD3* / P55096* / P28288* / ATP binding cassette subfamily D member 3* / ATP-binding cassette, sub-family D (ALD), member 3*  / complex
 ENSDARG00000074876 abcd1 / ATP-binding cassette, sub-family D (ALD), member 1 / P33897* / P48410* / ATP binding cassette subfamily D member 1*  / complex






 

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