ENSDARG00000059583


Danio rerio

Features
Gene ID: ENSDARG00000059583
  
Biological name :rcc1l
  
Synonyms : rcc1l / RCC1 like
  
Possible biological names infered from orthology : Q96I51 / Q9CYF5 / reculator of chromosome condensation 1 like
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 61404497
Gene end: 61431809
  
Corresponding Affymetrix probe sets: Dr.15821.1.A1_at (Zebrafish Array)   NM_001082803_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000077387
NCBI entrez gene - 555972     See in Manteia.
RefSeq - NM_001082803
RefSeq Peptide - NP_001076272
swissprot - A2BFP4
ZFIN ID - ZDB-GENE-060526-370
Ensembl - ENSDARG00000059583
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RCC1LENSGALG00000001174Gallus gallus
 RCC1LENSG00000274523Homo sapiens
 Rcc1lENSMUSG00000061979Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rpgrb / retinitis pigmentosa GTPase regulator b / RPGR* / Q92834* / retinitis pigmentosa GTPase regulator*ENSDARG0000005707424
rpgra / retinitis pigmentosa GTPase regulator a / RPGR* / Q92834* / retinitis pigmentosa GTPase regulator*ENSDARG0000005661723
rcc2 / Q6NYE2 / regulator of chromosome condensation 2 / Q8BK67* / Q9P258* / Protein RCC2 *ENSDARG0000001151020
rcbtb2 / regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 / O95199* / RCC1 and BTB domain containing protein 2*ENSDARG0000009068719
rcbtb1 / regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 / Q8NDN9* / RCC1 and BTB domain containing protein 1*ENSDARG0000003664518
sergef / secretion regulating guanine nucleotide exchange factor / Q80YD6* / Q9UGK8*ENSDARG0000007098618
rcc1 / regulator of chromosome condensation 1 / P18754* / Q8VE37*ENSDARG0000003715817


Protein motifs (from Interpro)
Interpro ID Name
 IPR000408  Regulator of chromosome condensation, RCC1
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr