ENSDARG00000037158


Danio rerio

Features
Gene ID: ENSDARG00000037158
  
Biological name :rcc1
  
Synonyms : rcc1 / regulator of chromosome condensation 1
  
Possible biological names infered from orthology : P18754 / Q8VE37
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 34185613
Gene end: 34195002
  
Corresponding Affymetrix probe sets: Dr.26430.1.A1_at (Zebrafish Array)   NM_213178_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000054025
NCBI entrez gene - 406457     See in Manteia.
RefSeq - XM_017351335
RefSeq - NM_213178
RefSeq Peptide - NP_998343
swissprot - Q6NY65
ZFIN ID - ZDB-GENE-040426-2216
Ensembl - ENSDARG00000037158
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RCC1ENSGALG00000030097Gallus gallus
 RCC1ENSG00000180198Homo sapiens
 Rcc1ENSMUSG00000028896Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rpgrb / retinitis pigmentosa GTPase regulator b / RPGR* / Q92834* / retinitis pigmentosa GTPase regulator*ENSDARG0000005707425
rcbtb2 / regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 / O95199* / RCC1 and BTB domain containing protein 2*ENSDARG0000009068722
rpgra / retinitis pigmentosa GTPase regulator a / RPGR* / Q92834* / retinitis pigmentosa GTPase regulator*ENSDARG0000005661722
rcc2 / Q6NYE2 / regulator of chromosome condensation 2 / Q8BK67* / Q9P258* / Protein RCC2 *ENSDARG0000001151021
sergef / secretion regulating guanine nucleotide exchange factor / Q80YD6* / Q9UGK8*ENSDARG0000007098620
rcbtb1 / regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 / Q8NDN9* / RCC1 and BTB domain containing protein 1*ENSDARG0000003664520
rcc1l / RCC1 like / Q96I51* / Q9CYF5* / reculator of chromosome condensation 1 like*ENSDARG0000005958319


Protein motifs (from Interpro)
Interpro ID Name
 IPR000408  Regulator of chromosome condensation, RCC1
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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