ENSDARG00000011510


Danio rerio

Features
Gene ID: ENSDARG00000011510
  
Biological name :rcc2
  
Synonyms : Q6NYE2 / rcc2 / regulator of chromosome condensation 2
  
Possible biological names infered from orthology : Protein RCC2 / Q8BK67 / Q9P258
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 21520769
Gene end: 21535040
  
Corresponding Affymetrix probe sets: Dr.828.1.A1_at (Zebrafish Array)   NM_213176_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000115464
Ensembl peptide - ENSDARP00000154575
Ensembl peptide - ENSDARP00000123228
Ensembl peptide - ENSDARP00000004838
NCBI entrez gene - 406455     See in Manteia.
RefSeq - NM_213176
RefSeq Peptide - NP_998341
swissprot - E9QGE3
swissprot - E9QCP1
swissprot - Q6NYE2
ZFIN ID - ZDB-GENE-040426-2213
Ensembl - ENSDARG00000011510
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RCC2ENSGALG00000031684Gallus gallus
 RCC2ENSG00000179051Homo sapiens
 Rcc2ENSMUSG00000040945Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rpgrb / retinitis pigmentosa GTPase regulator b / RPGR* / Q92834* / retinitis pigmentosa GTPase regulator*ENSDARG0000005707422
rpgra / retinitis pigmentosa GTPase regulator a / RPGR* / Q92834* / retinitis pigmentosa GTPase regulator*ENSDARG0000005661722
rcbtb2 / regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 / O95199* / RCC1 and BTB domain containing protein 2*ENSDARG0000009068719
rcbtb1 / regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 / Q8NDN9* / RCC1 and BTB domain containing protein 1*ENSDARG0000003664519
rcc1l / RCC1 like / Q96I51* / Q9CYF5* / reculator of chromosome condensation 1 like*ENSDARG0000005958318
rcc1 / regulator of chromosome condensation 1 / P18754* / Q8VE37*ENSDARG0000003715818
sergef / secretion regulating guanine nucleotide exchange factor / Q80YD6* / Q9UGK8*ENSDARG0000007098615


Protein motifs (from Interpro)
Interpro ID Name
 IPR000408  Regulator of chromosome condensation, RCC1
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001755 neural crest cell migration IMP
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
RHO GTPases Activate Formins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage misaligned with ceratohyal cartilage , abnormal
Show

 ZFA:0001460 pharyngeal arch cartilage pharyngeal arch cartilage misaligned with pharyngeal arch cartilage , abnormal
Show

 ZFA:0001611 pharyngeal arch 2 pharyngeal arch 2 morphology , abnormal
Show

 ZFA:0001612 pharyngeal arch 1 pharyngeal arch 1 morphology , abnormal
pharyngeal arch 1 fused with pharyngeal arch 2 , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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