ENSDARG00000060496


Danio rerio

Features
Gene ID: ENSDARG00000060496
  
Biological name :cacna1ha
  
Synonyms : cacna1ha / calcium channel, voltage-dependent, T type, alpha 1H subunit a
  
Possible biological names infered from orthology : CACNA1H / calcium voltage-gated channel subunit alpha1 H / O95180 / voltage-dependent T-type calcium channel subunit alpha-1H isoform 2
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 39759130
Gene end: 39952441
  
Corresponding Affymetrix probe sets: Dr.19023.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000155593
Ensembl peptide - ENSDARP00000127548
Ensembl peptide - ENSDARP00000145302
NCBI entrez gene - 560875     See in Manteia.
RefSeq - XM_009299686
swissprot - X1WBF7
ZFIN ID - ZDB-GENE-130103-1
Ensembl - ENSDARG00000060496
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CACNA1HENSGALG00000005215Gallus gallus
 O95180ENSG00000196557Homo sapiens
 Cacna1hENSMUSG00000024112Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cacna1g / calcium channel, voltage-dependent, T type, alpha 1G subunit / O43497* / calcium voltage-gated channel subunit alpha1 G*ENSDARG0000008991354
cacna1i / calcium channel, voltage-dependent, T type, alpha 1I subunit / Q9P0X4* / calcium voltage-gated channel subunit alpha1 I* / calcium channel, voltage-dependent, alpha 1I subunit*ENSDARG0000007052249
cacna1hb / calcium channel, voltage-dependent, T type, alpha 1H subunit b / O95180* / CACNA1H* / calcium voltage-gated channel subunit alpha1 H* / voltage-dependent T-type calcium channel s...ENSDARG0000009970848
scn1lab / sodium channel, voltage-gated, type I like, alpha b / SCN1A* / SCN9A* / SCN7A* / SCN2A* / SCN3A* / A2APX8* / P35498* / Q01118* / Q15858* / Q62205* / Q99250* / Q9NY46* / sodium vol...ENSDARG0000006274422
si:ch73-379f7.5 / CACNA1I (1 of many) / Q9P0X4* / CACNA1I* / calcium voltage-gated channel subunit alpha1 I* / calcium channel, voltage-dependent, alpha 1I subunit*ENSDARG0000009630721
scn1a / sodium channel, voltage-gated, type I, alpha / SCN9A* / SCN3A* / SCN2A* / SCN7A* / A2APX8* / P35498* / Q01118* / Q15858* / Q62205* / Q99250* / Q9NY46* / sodium voltage-gated channel...ENSDARG0000008681921
scn12aa / sodium channel, voltage gated, type XII, alpha a / SCN5A* / Q9R053* / Q9UI33* / Q9Y5Y9* / SCN10A* / SCN11A* / Q14524* / Q6QIY3* / Q9JJV9* / Sodium channel protein type 5 subunit a...ENSDARG0000009072421
scn8ab / sodium channel, voltage gated, type VIII, alpha subunit b / SCN8A* / Q9UQD0* / sodium voltage-gated channel alpha subunit 8* / sodium channel, voltage-gated, type VIII, alpha*ENSDARG0000001803221
scn12ab / sodium channel, voltage gated, type XII, alpha b / SCN5A* / Q9R053* / Q9UI33* / Q9Y5Y9* / SCN10A* / SCN11A* / Q14524* / Q6QIY3* / Q9JJV9* / Sodium channel protein type 5 subunit a...ENSDARG0000010231221
scn4aa / sodium channel, voltage-gated, type IV, alpha, a / SCN4A* / P35499* / sodium voltage-gated channel alpha subunit 4* / sodium channel, voltage-gated, type IV, alpha*ENSDARG0000009873820
scn8aa / sodium channel, voltage gated, type VIII, alpha subunit a / SCN8A* / Q9UQD0* / sodium voltage-gated channel alpha subunit 8* / sodium channel, voltage-gated, type VIII, alpha*ENSDARG0000000577520
scn4ab / sodium channel, voltage-gated, type IV, alpha, b / SCN4A* / P35499* / sodium voltage-gated channel alpha subunit 4* / sodium channel, voltage-gated, type IV, alpha*ENSDARG0000003458819
LO017974.1 / Q9P0X4* / CACNA1I* / calcium voltage-gated channel subunit alpha1 I*ENSDARG0000011574110


Protein motifs (from Interpro)
Interpro ID Name
 IPR002077  Voltage-dependent calcium channel, alpha-1 subunit
 IPR005445  Voltage-dependent calcium channel, T-type, alpha-1 subunit
 IPR005821  Ion transport domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0019228 neuronal action potential IBA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0045956 positive regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:0086010 membrane depolarization during action potential IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0005891 voltage-gated calcium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IEA
 molecular_functionGO:0005248 voltage-gated sodium channel activity IBA
 molecular_functionGO:0005262 calcium channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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