ENSDARG00000060929


Danio rerio

Features
Gene ID: ENSDARG00000060929
  
Biological name :rnf220a
  
Synonyms : ring finger protein 220a / rnf220a
  
Possible biological names infered from orthology : Q5VTB9 / Q6PDX6 / ring finger protein 220 / RNF220
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 33051730
Gene end: 33216740
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000117678
Ensembl peptide - ENSDARP00000157220
Ensembl peptide - ENSDARP00000154581
Ensembl peptide - ENSDARP00000144589
Ensembl peptide - ENSDARP00000121250
Ensembl peptide - ENSDARP00000120630
Ensembl peptide - ENSDARP00000080775
Ensembl peptide - ENSDARP00000116172
Ensembl peptide - ENSDARP00000117326
NCBI entrez gene - 561654     See in Manteia.
swissprot - E9QJE4
swissprot - B0S679
swissprot - B0S678
swissprot - A8WHS2
swissprot - A0A286YC01
swissprot - F1QY42
swissprot - Q08CD0
ZFIN ID - ZDB-GENE-060929-1006
Ensembl - ENSDARG00000060929
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF220ENSGALG00000010109Gallus gallus
 Q5VTB9ENSG00000187147Homo sapiens
 Q6PDX6ENSMUSG00000028677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf220b / ring finger protein 220b / Q5VTB9* / Q6PDX6* / RNF220* / ring finger protein 220*ENSDARG0000007518310


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031824  E3 ubiquitin-protein ligase RNF220, middle domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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