ENSDARG00000075183


Danio rerio

Features
Gene ID: ENSDARG00000075183
  
Biological name :rnf220b
  
Synonyms : ring finger protein 220b / rnf220b
  
Possible biological names infered from orthology : Q5VTB9 / Q6PDX6 / ring finger protein 220 / RNF220
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 18242505
Gene end: 18316482
  
Corresponding Affymetrix probe sets: Dr.13807.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113079
Ensembl peptide - ENSDARP00000117725
Ensembl peptide - ENSDARP00000151293
swissprot - B8JI49
swissprot - F1QZH9
ZFIN ID - ZDB-GENE-081104-195
Ensembl - ENSDARG00000075183
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF220ENSGALG00000010109Gallus gallus
 Q5VTB9ENSG00000187147Homo sapiens
 Q6PDX6ENSMUSG00000028677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf220a / ring finger protein 220a / Q5VTB9* / Q6PDX6* / RNF220* / ring finger protein 220*ENSDARG000000609299


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031824  E3 ubiquitin-protein ligase RNF220, middle domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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