ENSDARG00000062016


Danio rerio

Features
Gene ID: ENSDARG00000062016
  
Biological name :vps51
  
Synonyms : vacuolar protein sorting 51 homolog (S. cerevisiae) / vps51
  
Possible biological names infered from orthology : Q3UVL4 / Q71KT5 / Q9UID3 / Tm7sf2 / transmembrane 7 superfamily member 2 / VPS51, GARP complex subunit
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 26961965
Gene end: 26972430
  
Corresponding Affymetrix probe sets: Dr.6128.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000083577
swissprot - F1QLF1
ZFIN ID - ZDB-GENE-030131-6008
Ensembl - ENSDARG00000062016
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VPS51ENSGALG00000004166Gallus gallus
 VPS51ENSG00000149823Homo sapiens
 Q3UVL4ENSMUSG00000024799Mus musculus
 Vps51ENSMUSG00000024797Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR014812  Vacuolar protein sorting-associated protein 51
 IPR016159  Cullin repeat-like-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000036 liver and biliary system liver and biliary system malformed , abnormal
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 ZFA:0000112 gut gut quality , abnormal
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 ZFA:0000123 liver liver quality , abnormal
liver fatty , abnormal
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 ZFA:0000303 female organism female organism trunk increased size , abnormal
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 ZFA:0001094 whole organism whole organism dead , abnormal
whole organism viability , abnormal
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 ZFA:0001100 hepatic duct hepatic duct physical object quality , abnormal
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 ZFA:0001249 exocrine pancreas exocrine pancreas Golgi apparatus dilated , abnormal
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 ZFA:0001338 intestine intestine fatty , abnormal
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 ZFA:0005169 intrahepatic bile duct intrahepatic bile duct decreased amount , abnormal
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 ZFA:0009111 hepatocyte hepatocyte decreased functionality , abnormal
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 ZFA:0009269 enterocyte enterocyte Golgi apparatus dilated , abnormal
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 ZFA:0009397 cholangiocyte cholangiocyte Golgi apparatus dilated , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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