ENSDARG00000062854


Danio rerio

Features
Gene ID: ENSDARG00000062854
  
Biological name :sdk1b
  
Synonyms : sdk1b / sidekick cell adhesion molecule 1b
  
Possible biological names infered from orthology : Protein sidekick-1 / Q3UH53 / Q7Z5N4 / SDK1 / sidekick cell adhesion molecule 1
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 11124746
Gene end: 11519934
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139978
Ensembl peptide - ENSDARP00000085638
Ensembl peptide - ENSDARP00000116036
Ensembl peptide - ENSDARP00000121891
swissprot - A0A0H2UKU9
swissprot - F1QTQ5
swissprot - F1R721
swissprot - F1R796
ZFIN ID - ZDB-GENE-090311-17
Ensembl - ENSDARG00000062854
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SDK1ENSGALG00000004420Gallus gallus
 SDK1ENSG00000146555Homo sapiens
 Sdk1ENSMUSG00000039683Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sdk1a / sidekick cell adhesion molecule 1a / SDK1* / Q7Z5N4* / Q3UH53* / Protein sidekick-1 * / sidekick cell adhesion molecule 1*ENSDARG0000007886672
sdk2b / sidekick cell adhesion molecule 2b / SDK2* / Q6V4S5* / Q58EX2* / Protein sidekick-2 * / sidekick cell adhesion molecule 2*ENSDARG0000006045257
si:ch211-148f13.1 / SDK2* / Q6V4S5* / Q58EX2* / Protein sidekick-2 * / sidekick cell adhesion molecule 2*ENSDARG0000010216155
dscamb / Down syndrome cell adhesion molecule b / DSCAM* / Q9ERC8* / O60469* / DS cell adhesion molecule* / Down syndrome cell adhesion molecule homolog *ENSDARG0000002811816
dscama / Down syndrome cell adhesion molecule a / DSCAM* / Q9ERC8* / O60469* / DS cell adhesion molecule* / Down syndrome cell adhesion molecule homolog *ENSDARG0000002486516
neo1a / neogenin 1a / NEO1* / Q92859* / neogenin* / neogenin 1*ENSDARG0000010285514
neo1b / neogenin 1b / NEO1* / Q92859* / neogenin* / neogenin 1*ENSDARG0000007510014
dscaml1 / Down syndrome cell adhesion molecule like 1 / Q8TD84* / DS cell adhesion molecule like 1*ENSDARG0000009805713
CABZ01088906.1 / DCC* / P43146* / DCC netrin 1 receptor*ENSDARG0000010428212
igdcc4 / immunoglobulin superfamily, DCC subclass, member 4 / Q8TDY8* / Q9EQS9*ENSDARG0000007691912
prtgb / protogenin homolog b (Gallus gallus) / PRTG* / Q2EY15* / Q2VWP7* / protogenin*ENSDARG000000404429
igdcc3 / immunoglobulin superfamily, DCC subclass, member 3 / Q8BQC3* / Q8IVU1*ENSDARG000000751588
si:ch211-57n23.4ENSDARG000000785577
neo1b / neogenin 1bENSDARG000001020691


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
SDK interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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