ENSDARG00000028118


Danio rerio

Features
Gene ID: ENSDARG00000028118
  
Biological name :dscamb
  
Synonyms : Down syndrome cell adhesion molecule b / dscamb
  
Possible biological names infered from orthology : Down syndrome cell adhesion molecule homolog / DSCAM / DS cell adhesion molecule / O60469 / Q9ERC8
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 6138423
Gene end: 6404443
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000088811
Ensembl peptide - ENSDARP00000116627
NCBI entrez gene - 386937     See in Manteia.
swissprot - F1Q4W9
swissprot - F1R170
ZFIN ID - ZDB-GENE-031118-67
Ensembl - ENSDARG00000028118
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DSCAMENSGALG00000016138Gallus gallus
 DSCAMENSG00000171587Homo sapiens
 DscamENSMUSG00000050272Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dscama / Down syndrome cell adhesion molecule a / DSCAM* / Q9ERC8* / O60469* / DS cell adhesion molecule* / Down syndrome cell adhesion molecule homolog *ENSDARG0000002486578
dscaml1 / Down syndrome cell adhesion molecule like 1 / Q8TD84* / DS cell adhesion molecule like 1*ENSDARG0000009805742
si:ch211-148f13.1 / SDK2* / Q6V4S5* / Q58EX2* / Protein sidekick-2 * / sidekick cell adhesion molecule 2*ENSDARG0000010216118
sdk2b / sidekick cell adhesion molecule 2b / SDK2* / Q6V4S5* / Q58EX2* / Protein sidekick-2 * / sidekick cell adhesion molecule 2*ENSDARG0000006045218
sdk1b / sidekick cell adhesion molecule 1b / SDK1* / Q7Z5N4* / Q3UH53* / Protein sidekick-1 * / sidekick cell adhesion molecule 1*ENSDARG0000006285417
sdk1a / sidekick cell adhesion molecule 1a / SDK1* / Q7Z5N4* / Q3UH53* / Protein sidekick-1 * / sidekick cell adhesion molecule 1*ENSDARG0000007886617
neo1a / neogenin 1a / NEO1* / Q92859* / neogenin* / neogenin 1*ENSDARG0000010285514
neo1b / neogenin 1b / NEO1* / Q92859* / neogenin* / neogenin 1*ENSDARG0000007510013
CABZ01088906.1 / DCC* / P43146* / DCC netrin 1 receptor*ENSDARG0000010428212
igdcc4 / immunoglobulin superfamily, DCC subclass, member 4 / Q8TDY8* / Q9EQS9*ENSDARG0000007691911
prtgb / protogenin homolog b (Gallus gallus) / PRTG* / Q2EY15* / Q2VWP7* / protogenin*ENSDARG000000404429
si:ch211-57n23.4ENSDARG000000785578
igdcc3 / immunoglobulin superfamily, DCC subclass, member 3 / Q8BQC3* / Q8IVU1*ENSDARG000000751588
neo1b / neogenin 1bENSDARG000001020691


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR033027  Down syndrome cell adhesion molecule, chordates


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007399 nervous system development IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
DSCAM interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000028118 dscamb / Down syndrome cell adhesion molecule b / DSCAM* / Q9ERC8* / O60469* / DS cell adhesion molecule* / Down syndrome cell adhesion molecule homolog *  / complex / reaction
 ENSDARG00000024865 dscama / Down syndrome cell adhesion molecule a / DSCAM* / Q9ERC8* / O60469* / DS cell adhesion molecule* / Down syndrome cell adhesion molecule homolog *  / reaction / complex






 

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