ENSDARG00000062972


Danio rerio

Features
Gene ID: ENSDARG00000062972
  
Biological name :hip1
  
Synonyms : hip1 / huntingtin interacting protein 1
  
Possible biological names infered from orthology : O00291 / Q8VD75
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 16935390
Gene end: 17025212
  
Corresponding Affymetrix probe sets: Dr.24004.1.A1_at (Zebrafish Array)   Dr.4336.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000013812
Ensembl peptide - ENSDARP00000127621
Ensembl peptide - ENSDARP00000127814
Ensembl peptide - ENSDARP00000129368
NCBI entrez gene - 793823     See in Manteia.
swissprot - F1R6L2
swissprot - X1WBM9
swissprot - X1WC71
swissprot - X1WGL1
ZFIN ID - ZDB-GENE-010328-15
Ensembl - ENSDARG00000062972
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HIP1ENSGALG00000040908Gallus gallus
 HIP1ENSG00000127946Homo sapiens
 Hip1ENSMUSG00000039959Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hip1rb / huntingtin interacting protein 1 related b / HIP1R* / O75146* / Q9JKY5* / huntingtin interacting protein 1 related* / Huntingtin-interacting protein 1-related protein *ENSDARG0000010245848
tln2a / talin 2a / TLN2* / Q9Y4G6* / talin 2*ENSDARG0000001790121
tln1 / talin 1 / P26039* / Q9Y490*ENSDARG0000010072921
tln2b / talin 2b / TLN2* / Q9Y4G6* / talin 2*ENSDARG0000011097315
hip1ra / huntingtin interacting protein 1 related a / HIP1R* / O75146* / huntingtin interacting protein 1 related*ENSDARG0000006062713
CABZ01046980.1 / TLN2* / Q9Y4G6* / talin 2*ENSDARG000001123422


Protein motifs (from Interpro)
Interpro ID Name
 IPR002558  I/LWEQ domain
 IPR008942  ENTH/VHS
 IPR011417  AP180 N-terminal homology (ANTH) domain
 IPR013809  ENTH domain
 IPR030224  Sla2 family
 IPR030554  Huntingtin-interacting protein 1
 IPR032422  Huntingtin-interacting protein 1, clathrin-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001878 response to yeast IDA
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0043009 chordate embryonic development IMP
 biological_processGO:0048268 clathrin coat assembly IEA
 biological_processGO:0072583 clathrin-dependent endocytosis IEA
 cellular_componentGO:0030136 clathrin-coated vesicle IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005543 phospholipid binding IEA
 molecular_functionGO:0030276 clathrin binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000106 extension extension decreased size , abnormal
extension aplastic , abnormal
Show

 ZFA:0001115 trunk trunk decreased width , abnormal
Show

 ZFA:0001273 ventral mandibular arch ventral mandibular arch aplastic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr