ENSDARG00000063437


Danio rerio

Features
Gene ID: ENSDARG00000063437
  
Biological name :wnt9a
  
Synonyms : wingless-type MMTV integration site family, member 9A / wnt9a
  
Possible biological names infered from orthology : O14904 / Q8R5M2 / Wnt family member 9A
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 3201345
Gene end: 3271007
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105575
NCBI entrez gene - 751644     See in Manteia.
RefSeq - XM_005163661
swissprot - B6V3E1
swissprot - F6NSS8
ZFIN ID - ZDB-GENE-060825-97
Ensembl - ENSDARG00000063437
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WNT9AENSGALG00000005401Gallus gallus
 WNT9AENSG00000143816Homo sapiens
 Wnt9aENSMUSG00000000126Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
wnt9b / wingless-type MMTV integration site family, member 9B / O14905* / O35468* / Wnt family member 9B*ENSDARG0000003788956
wnt10a / wingless-type MMTV integration site family, member 10a / Q9GZT5* / Wnt family member 10A*ENSDARG0000001715533
wnt10b / wingless-type MMTV integration site family, member 10b / O00744* / P48614* / Wnt family member 10B*ENSDARG0000004092531
wnt8b / wingless-type MMTV integration site family, member 8b / Q93098* / Wnt family member 8B*ENSDARG0000000691129
wnt8a / wingless-type MMTV integration site family, member 8a / Q64527* / Q9H1J5* / Wnt family member 8A*ENSDARG0000005291028
wnt8a / wingless-type MMTV integration site family, member 8a / Q64527* / Q9H1J5* / Wnt family member 8A*ENSDARG0000007850726


Protein motifs (from Interpro)
Interpro ID Name
 IPR005817  Wnt
 IPR013303  Wnt-9a protein
 IPR018161  Wnt protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0016055 Wnt signaling pathway IBA
 biological_processGO:0030182 neuron differentiation IBA
 biological_processGO:0045165 cell fate commitment IBA
 biological_processGO:0048701 embryonic cranial skeleton morphogenesis IMP
 biological_processGO:0048702 embryonic neurocranium morphogenesis IMP
 biological_processGO:0051216 cartilage development IMP
 biological_processGO:0060037 pharyngeal system development IMP
 biological_processGO:0060218 hematopoietic stem cell differentiation IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005109 frizzled binding IBA


Pathways (from Reactome)
Pathway description
WNT ligand biogenesis and trafficking


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000037 anatomical structure anatomical structure increased amount , abnormal
Show

 ZFA:0000422 retroarticular retroarticular absent , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased amount , abnormal
Show

 ZFA:0001114 head head hypoplastic , abnormal
Show

 ZFA:0001205 Meckel s cartilage Meckels cartilage chondrocyte morphology , abnormal
Meckels cartilage chondrocyte positional polarity , abnormal
Meckels cartilage shortened , abnormal
Show

 ZFA:0001239 ceratobranchial 5 bone ceratobranchial 5 bone absent , abnormal
Show

 ZFA:0001273 ventral mandibular arch ventral mandibular arch aplastic , abnormal
Show

 ZFA:0001290 stomodeum stomodeum shape , abnormal
Show

 ZFA:0001321 neurocranial trabecula neurocranial trabecula proximal region decreased length , abnormal
neurocranial trabecula chondrocyte circular , abnormal
neurocranial trabecula chondrocyte disorganized , abnormal
neurocranial trabecula proximal region truncated , abnormal
Show

 ZFA:0001405 ethmoid cartilage ethmoid cartilage decreased length , abnormal
ethmoid cartilage has fewer parts of type chondrocyte , abnormal
ethmoid cartilage chondrocyte shape , abnormal
ethmoid cartilage chondrocyte disorganized , abnormal
ethmoid cartilage aplastic , abnormal
ethmoid cartilage chondrocyte proliferation decreased occurrence , abnormal
Show

 ZFA:0001423 parachordal cartilage parachordal cartilage postero-lateral region aplastic , abnormal
Show

 ZFA:0001508 trabecula communis trabecula communis aplastic , abnormal
Show

 ZFA:0001511 interhyal cartilage interhyal cartilage chondrocyte decreased amount , abnormal
Show

 ZFA:0001591 endochondral bone endochondral bone absent , abnormal
Show

 ZFA:0001612 pharyngeal arch 1 pharyngeal arch 1 mesenchyme decreased amount , abnormal
Show

 ZFA:0001613 pharyngeal arch 3-7 pharyngeal arch 3-7 morphology , abnormal
Show

 ZFA:0001652 head muscle head muscle decreased length , abnormal
Show

 ZFA:0005028 ventral wall of dorsal aorta ventral wall of dorsal aorta hematopoietic stem cell decreased amount , abnormal
Show

 ZFA:0005484 quadrate-anguloarticular joint quadrate-anguloarticular joint morphology , abnormal
Show

 ZFA:0005509 palate palate increased length , abnormal
palate decreased width , abnormal
palate chondrocyte size , abnormal
palate chondrocyte irregular spatial pattern , abnormal
Show

 ZFA:0009003 cranial neural crest cell cranial neural crest cell dorsal region mislocalised laterally , abnormal
cranial neural crest cell lateralized , abnormal
Show

 ZFA:0009014 hematopoietic stem cell hematopoietic stem cell mitotic G1 phase arrested , abnormal
Show

 ZFA:0009065 endothelial cell endothelial cell increased amount , abnormal
Show

 ZFA:0009084 chondrocyte chondrocyte microtubule organizing center disorganized , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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