ENSDARG00000068761


Danio rerio

Features
Gene ID: ENSDARG00000068761
  
Biological name :mespab
  
Synonyms : mesoderm posterior ab / mespab
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 11015417
Gene end: 11016675
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000090346
NCBI entrez gene - 100006128     See in Manteia.
RefSeq - NM_001265583
RefSeq Peptide - NP_001252512
swissprot - F1QZT9
ZFIN ID - ZDB-GENE-090817-2
Ensembl - ENSDARG00000068761
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mespaa / mesoderm posterior aaENSDARG0000001707835
mespba / mesoderm posterior ba / MESP1* / MESP2* / Q9BRJ9* / P97309* / Q0VG99* / Mesoderm posterior protein 1 * / mesoderm posterior bHLH transcription factor 2* / mesoderm posterior bHLH t...ENSDARG0000003034730
mespbb / mesoderm posterior bb / MESP1* / MESP2* / Q9BRJ9* / P97309* / Q0VG99* / Mesoderm posterior protein 1 * / mesoderm posterior bHLH transcription factor 2* / mesoderm posterior bHLH t...ENSDARG0000009794728
msgn1 / Q90ZL1 / mesogenin 1 / A6NI15* / Q9JK54*ENSDARG0000007054616


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001707 mesoderm formation IBA
 biological_processGO:0001757 somite specification IGI
 biological_processGO:0003007 heart morphogenesis IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0032525 somite rostral/caudal axis specification IGI
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0061371 determination of heart left/right asymmetry IGI
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000028 heart primordium heart primordium absent , abnormal
heart primordium right side mislocalised , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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