ENSDARG00000068894


Danio rerio

Features
Gene ID: ENSDARG00000068894
  
Biological name :nrip1b
  
Synonyms : nrip1b / nuclear receptor interacting protein 1b
  
Possible biological names infered from orthology : Mus musculus nuclear receptor interacting protein 1 (Nrip1), transcript variant 2, mRNA. / NRIP1 / nuclear receptor interacting protein 1 / P48552 / Q8CBD1
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 38256556
Gene end: 38316134
  
Corresponding Affymetrix probe sets: Dr.4603.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124782
NCBI entrez gene - 100001853     See in Manteia.
swissprot - F1QVR4
ZFIN ID - ZDB-GENE-030131-4173
Ensembl - ENSDARG00000068894
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NRIP1ENSGALG00000015681Gallus gallus
 NRIP1ENSG00000180530Homo sapiens
 Nrip1ENSMUSG00000048490Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nrip1a / nuclear receptor interacting protein 1a / NRIP1* / Q8CBD1* / P48552* / nuclear receptor interacting protein 1* / Mus musculus nuclear receptor interacting protein 1 (Nrip1), transc...ENSDARG0000006896543


Protein motifs (from Interpro)
Interpro ID Name
 IPR026649  Nuclear receptor-interacting protein 1
 IPR031405  Nuclear receptor-interacting protein 1, repression domain 1
 IPR031406  Nuclear receptor-interacting protein 1, repression domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0005102 signaling receptor binding IEA


Pathways (from Reactome)
Pathway description
SUMOylation of transcription cofactors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000044267 sumo1 / Q7SZR5 / small ubiquitin-like modifier 1 / P63166* / P63165* / Small ubiquitin-related modifier 1 *  / reaction / complex
 ENSDARG00000052649 Q9DDJ0 / ube2ia / ubiquitin-conjugating enzyme E2Ia / UBE2I* / P63280* / P63279* / ubiquitin conjugating enzyme E2 I*  / reaction
 ENSDARG00000007438 ube2ib / Q9W6H5 / ubiquitin-conjugating enzyme E2Ib / UBE2I* / P63279* / ubiquitin conjugating enzyme E2 I*  / reaction






 

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