ENSGALG00000015681


Gallus gallus

Features
Gene ID: ENSGALG00000015681
  
Biological name :NRIP1
  
Synonyms : NRIP1 / nuclear receptor interacting protein 1
  
Possible biological names infered from orthology : Mus musculus nuclear receptor interacting protein 1 (Nrip1), transcript variant 2, mRNA. / P48552 / Q8CBD1
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 98322194
Gene end: 98325661
  
Corresponding Affymetrix probe sets: GgaAffx.10000.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042018
NCBI entrez gene - 101749375     See in Manteia.
RefSeq - XM_015298704
RefSeq - XM_015298712
RefSeq - XM_015298715
RefSeq - XM_015298718
RefSeq - XM_015298725
RefSeq - XM_015298731
RefSeq - XM_015298735
RefSeq - XM_015298743
RefSeq - XM_015298754
RefSeq - XM_015298695
swissprot - R4GIS3
Ensembl - ENSGALG00000015681
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nrip1aENSDARG00000068965Danio rerio
 nrip1bENSDARG00000068894Danio rerio
 NRIP1ENSG00000180530Homo sapiens
 Nrip1ENSMUSG00000048490Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026649  Nuclear receptor-interacting protein 1
 IPR031405  Nuclear receptor-interacting protein 1, repression domain 1
 IPR031406  Nuclear receptor-interacting protein 1, repression domain 2
 IPR031407  Nuclear receptor-interacting protein 1, repression domain 3
 IPR031408  Nuclear receptor-interacting protein 1, repression domain 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001543 ovarian follicle rupture IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007623 circadian rhythm IEA
 biological_processGO:0019915 lipid storage IEA
 biological_processGO:0030728 ovulation IEA
 biological_processGO:0032922 circadian regulation of gene expression IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0071392 cellular response to estradiol stimulus IEA
 cellular_componentGO:0000118 histone deacetylase complex IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0001046 core promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0030331 estrogen receptor binding IEA
 molecular_functionGO:0035257 nuclear hormone receptor binding IEA
 molecular_functionGO:0035259 glucocorticoid receptor binding IEA
 molecular_functionGO:0042826 histone deacetylase binding IEA
 molecular_functionGO:0042974 retinoic acid receptor binding IEA
 molecular_functionGO:0046965 retinoid X receptor binding IEA


Pathways (from Reactome)
Pathway description
SUMOylation of transcription cofactors
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000008435 SUMO1 / Q8QGH2 / Small ubiquitin-related modifier 1 / P63166* / P63165* / small ubiquitin-like modifier 1*  / complex / reaction
 ENSGALG00000006428 UBE2I / P63283 / SUMO-conjugating enzyme UBC9 / P63280* / P63279* / ubiquitin conjugating enzyme E2 I*  / reaction






 

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