ENSDARG00000069196


Danio rerio

Features
Gene ID: ENSDARG00000069196
  
Biological name :ebf1b
  
Synonyms : early B cell factor 1b / ebf1b
  
Possible biological names infered from orthology : early B cell factor 1 / EBF1 / Q07802 / Q9UH73
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 33724979
Gene end: 33995710
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000091281
Ensembl peptide - ENSDARP00000144554
Ensembl peptide - ENSDARP00000116056
NCBI entrez gene - 557777     See in Manteia.
swissprot - E7F5K2
swissprot - A0A286YBI5
swissprot - F1R6Z5
ZFIN ID - ZDB-GENE-090814-2
Ensembl - ENSDARG00000069196
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EBF1ENSGALG00000003699Gallus gallus
 EBF1ENSG00000164330Homo sapiens
 Ebf1ENSMUSG00000057098Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ebf1a / ebf3a / early B cell factor 3a / EBF1* / Q9UH73* / Q07802* / early B cell factor 1*ENSDARG0000009984991
ebf3a / early B cell factor 3a / EBF3* / O08791* / Q9H4W6* / early B cell factor 3*ENSDARG0000010024477
ebf2 / early B cell factor 2 / O08792* / Q9HAK2*ENSDARG0000004252567
ebf3b / early B cell factor 3bENSDARG0000009128758
si:ch211-51e8.2 / EBF1 (1 of many) / EBF1* / Q07802* / Q9UH73* / early B cell factor 1*ENSDARG0000009263531


Protein motifs (from Interpro)
Interpro ID Name
 IPR002909  IPT domain
 IPR003523  Transcription factor COE
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR018350  Transcription factor COE, conserved site
 IPR032200  Transcription factor COE, DNA-binding domain
 IPR032201  Transcription factor COE, helix-loop-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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