ENSDARG00000069378


Danio rerio

Features
Gene ID: ENSDARG00000069378
  
Biological name :pard6a
  
Synonyms : par-6 family cell polarity regulator alpha / pard6a
  
Possible biological names infered from orthology : Partitioning defective 6 homolog alpha / Q9NPB6 / Q9Z101
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 22028674
Gene end: 22094102
  
Corresponding Affymetrix probe sets: Dr.3742.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000091677
swissprot - A5WW50
ZFIN ID - ZDB-GENE-070705-215
Ensembl - ENSDARG00000069378
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PARD6AENSGALG00000001214Gallus gallus
 PARD6AENSG00000102981Homo sapiens
 Pard6aENSMUSG00000005699Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pard6b / par-6 partitioning defective 6 homolog beta (C. elegans) / Q9BYG5* / Q9JK83* / Partitioning defective 6 homolog beta * / par-6 family cell polarity regulator beta*ENSDARG0000000386546
pard6gb / par-6 family cell polarity regulator gamma bENSDARG0000003609043
pard6ga / par-6 family cell polarity regulator gamma a / PARD6G* / Q9BYG4* / Q9JK84* / Partitioning defective 6 homolog gamma * / par-6 family cell polarity regulator gamma*ENSDARG0000003187636


Protein motifs (from Interpro)
Interpro ID Name
 IPR000270  PB1 domain
 IPR001478  PDZ domain
 IPR034868  Partitioning defective protein 6, PB1 domain
 IPR034872  Partitioning defective 6 homologue alpha


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001841 neural tube formation IGI
 biological_processGO:0007163 establishment or maintenance of cell polarity IEA
 cellular_componentGO:0016324 apical plasma membrane IDA


Pathways (from Reactome)
Pathway description
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
Tight junction interactions
Asymmetric localization of PCP proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr