ENSDARG00000003865


Danio rerio

Features
Gene ID: ENSDARG00000003865
  
Biological name :pard6b
  
Synonyms : par-6 partitioning defective 6 homolog beta (C. elegans) / pard6b
  
Possible biological names infered from orthology : par-6 family cell polarity regulator beta / Partitioning defective 6 homolog beta / Q9BYG5 / Q9JK83
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 19066696
Gene end: 19103855
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000008287
NCBI entrez gene - 100124652     See in Manteia.
RefSeq - NM_001102675
RefSeq Peptide - NP_001096145
swissprot - F1R754
ZFIN ID - ZDB-GENE-090312-133
Ensembl - ENSDARG00000003865
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PARD6BENSGALG00000007994Gallus gallus
 PARD6BENSG00000124171Homo sapiens
 Pard6bENSMUSG00000044641Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pard6gb / par-6 family cell polarity regulator gamma bENSDARG0000003609059
pard6a / par-6 family cell polarity regulator alpha / Q9NPB6* / Q9Z101* / Partitioning defective 6 homolog alpha *ENSDARG0000006937847
pard6ga / par-6 family cell polarity regulator gamma a / PARD6G* / Q9BYG4* / Q9JK84* / Partitioning defective 6 homolog gamma * / par-6 family cell polarity regulator gamma*ENSDARG0000003187646


Protein motifs (from Interpro)
Interpro ID Name
 IPR000270  PB1 domain
 IPR001478  PDZ domain
 IPR034868  Partitioning defective protein 6, PB1 domain
 IPR034873  Partitioning defective 6 homologue beta


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007043 cell-cell junction assembly IEA
 biological_processGO:0007163 establishment or maintenance of cell polarity IEA
 cellular_componentGO:0016324 apical plasma membrane IDA


Pathways (from Reactome)
Pathway description
Tight junction interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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