ENSGALG00000007994


Gallus gallus

Features
Gene ID: ENSGALG00000007994
  
Biological name :PARD6B
  
Synonyms : par-6 family cell polarity regulator beta / PARD6B
  
Possible biological names infered from orthology : Partitioning defective 6 homolog beta / Q9BYG5 / Q9JK83
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 13684034
Gene end: 13696732
  
Corresponding Affymetrix probe sets: Gga.12576.1.S1_at (Chicken Array)   GgaAffx.22431.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012963
NCBI entrez gene - 419352     See in Manteia.
RefSeq - NM_001044641
RefSeq Peptide - NP_001038106
swissprot - Q0PVE4
Ensembl - ENSGALG00000007994
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pard6bENSDARG00000003865Danio rerio
 PARD6BENSG00000124171Homo sapiens
 Pard6bENSMUSG00000044641Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PARD6G / par-6 family cell polarity regulator gamma / Q9BYG4* / Q9JK84* / Partitioning defective 6 homolog gamma *ENSGALG0000001359462
PARD6A / par-6 family cell polarity regulator alpha / Q9NPB6* / Q9Z101* / Partitioning defective 6 homolog alpha *ENSGALG0000000121453


Protein motifs (from Interpro)
Interpro ID Name
 IPR000270  PB1 domain
 IPR001478  PDZ domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007043 cell-cell junction assembly IEA
 biological_processGO:0007163 establishment or maintenance of cell polarity IEA
 biological_processGO:0065003 protein-containing complex assembly IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0005938 cell cortex IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0045177 apical part of cell IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000009364 PRKCI / protein kinase C iota type / P41743* / Q62074* / protein kinase C iota*  / complex






 

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contact: otassy@igbmc.fr