ENSMUSG00000044641


Mus musculus

Features
Gene ID: ENSMUSG00000044641
  
Biological name :Pard6b
  
Synonyms : Pard6b / Partitioning defective 6 homolog beta / Q9JK83
  
Possible biological names infered from orthology : par-6 family cell polarity regulator beta / Q9BYG5
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: H3
Gene start: 168081004
Gene end: 168101203
  
Corresponding Affymetrix probe sets: 10478907 (MoGene1.0st)   1423174_a_at (Mouse Genome 430 2.0 Array)   1423175_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000052619
NCBI entrez gene - 58220     See in Manteia.
MGI - MGI:2135605
RefSeq - NM_021409
RefSeq Peptide - NP_067384
swissprot - Q9JK83
Ensembl - ENSMUSG00000044641
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pard6bENSDARG00000003865Danio rerio
 PARD6BENSGALG00000007994Gallus gallus
 PARD6BENSG00000124171Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pard6g / Q9JK84 / Partitioning defective 6 homolog gamma / Q9BYG4* / par-6 family cell polarity regulator gamma*ENSMUSG0000005621463
Pard6a / Q9Z101 / Partitioning defective 6 homolog alpha / Q9NPB6* / par-6 family cell polarity regulator alpha*ENSMUSG0000000569948


Protein motifs (from Interpro)
Interpro ID Name
 IPR000270  PB1 domain
 IPR001478  PDZ domain
 IPR034868  Partitioning defective protein 6, PB1 domain
 IPR034873  Partitioning defective 6 homologue beta
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007043 cell-cell junction assembly IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007163 establishment or maintenance of cell polarity IEA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0065003 protein-containing complex assembly IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0005923 bicellular tight junction ISS
 cellular_componentGO:0005938 cell cortex IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IDA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0045177 apical part of cell IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Tight junction interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000038235 F11r / O88792 / Junctional adhesion molecule A / Q9Y624* / F11 receptor*  / reaction / complex
 ENSMUSG00000037643 Prkci / Q62074 / protein kinase C, iota / P41743*  / complex
 ENSMUSG00000025812 Pard3 / Q99NH2 / par-3 family cell polarity regulator / Q8TEW0*  / complex






 

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