ENSDARG00000069675


Danio rerio

Features
Gene ID: ENSDARG00000069675
  
Biological name :her8.2
  
Synonyms : hairy-related 8.2 / her8.2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 7176182
Gene end: 7178865
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000092351
NCBI entrez gene - 565269     See in Manteia.
RefSeq - NM_001166166
RefSeq - XM_005157462
RefSeq Peptide - NP_001159638
swissprot - F1Q965
ZFIN ID - ZDB-GENE-060815-4
Ensembl - ENSDARG00000069675
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000028415Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
her8a / hairy-related 8aENSDARG0000001636341
her13 / hairy-related 13 / HES6* / Q9JHE6* / Q96HZ4* / Transcription cofactor HES-6 * / hes family bHLH transcription factor 6*ENSDARG0000000709728
her9 / hairy-related 9 / HES4* / Q9HCC6* / hes family bHLH transcription factor 4*ENSDARG0000005643828
her6 / hairy-related 6 / HES1* / Q14469* / P35428* / Transcription factor HES-1 * / hes family bHLH transcription factor 1*ENSDARG0000000651427
hes6 / hes family bHLH transcription factor 6ENSDARG0000001933526
hes2.2 / hes family bHLH transcription factor 2, tandem duplicate 2 / HES2* / O54792* / Q9Y543* / Transcription factor HES-2 * / hes family bHLH transcription factor 2*ENSDARG0000006816823
hes2.1 / hes family bHLH transcription factor 2, tandem duplicate 1 / HES2* / O54792* / Q9Y543* / Transcription factor HES-2 * / hes family bHLH transcription factor 2*ENSDARG0000007489718


Protein motifs (from Interpro)
Interpro ID Name
 IPR003650  Orange domain
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr