ENSDARG00000070922


Danio rerio

Features
Gene ID: ENSDARG00000070922
  
Biological name :cnbpb
  
Synonyms : CCHC-type zinc finger, nucleic acid binding protein b / cnbpb
  
Possible biological names infered from orthology : CCHC-type zinc finger nucleic acid binding protein / CNBP / Mus musculus cellular nucleic acid binding protein (Cnbp), transcript variant 4, mRNA. / P53996 / P62633 / Q8WW36 / ZCCHC13 / zinc finger, CCHC domain containing 13 / zinc finger CCHC-type containing 13
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 491587
Gene end: 497854
  
Corresponding Affymetrix probe sets: Dr.25850.3.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000129692
Ensembl peptide - ENSDARP00000095293
NCBI entrez gene - 335839     See in Manteia.
RefSeq - NM_001326405
RefSeq Peptide - NP_001313334
swissprot - E7FCQ0
ZFIN ID - ZDB-GENE-030131-7782
Ensembl - ENSDARG00000070922
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNBPENSGALG00000005001Gallus gallus
 CNBPENSG00000169714Homo sapiens
 Q8WW36ENSG00000187969Homo sapiens
 CnbpENSMUSG00000030057Mus musculus
 Zcchc13ENSMUSG00000031330Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cnbpa / CCHC-type zinc finger, nucleic acid binding protein a / CNBP* / P62633* / Q8WW36* / P53996* / ZCCHC13* / zinc finger CCHC-type containing 13* / zinc finger, CCHC domain containing 1...ENSDARG0000004577686


Protein motifs (from Interpro)
Interpro ID Name
 IPR001878  Zinc finger, CCHC-type
 IPR025836  Zinc knuckle CX2CX4HX4C


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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