ENSGALG00000005001


Gallus gallus

Features
Gene ID: ENSGALG00000005001
  
Biological name :CNBP
  
Synonyms : cellular nucleic acid-binding protein / CNBP
  
Possible biological names infered from orthology : CCHC-type zinc finger nucleic acid binding protein / Mus musculus cellular nucleic acid binding protein (Cnbp), transcript variant 4, mRNA. / P53996 / P62633
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 5043528
Gene end: 5052861
  
Corresponding Affymetrix probe sets: Gga.18114.1.A1_at (Chicken Array)   Gga.18114.1.S1_at (Chicken Array)   Gga.3333.2.A1_at (Chicken Array)   Gga.3333.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058852
Ensembl peptide - ENSGALP00000063745
Ensembl peptide - ENSGALP00000063599
Ensembl peptide - ENSGALP00000035496
NCBI entrez gene - 395731     See in Manteia.
RefSeq - XM_015292961
RefSeq - NM_204907
RefSeq - XM_015292957
RefSeq - XM_015292958
RefSeq - XM_015292959
RefSeq - XM_015292960
RefSeq Peptide - NP_990238
swissprot - A0A1L1RY17
swissprot - A0A1L1RXN1
swissprot - A0A1D6UPT3
swissprot - O57348
Ensembl - ENSGALG00000005001
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cnbpaENSDARG00000045776Danio rerio
 cnbpbENSDARG00000070922Danio rerio
 CNBPENSG00000169714Homo sapiens
 CnbpENSMUSG00000030057Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001878  Zinc finger, CCHC-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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