ENSDARG00000071051


Danio rerio

Features
Gene ID: ENSDARG00000071051
  
Biological name :cbx6a
  
Synonyms : cbx6a / chromobox homolog 6a
  
Possible biological names infered from orthology : CBX6 / chromobox 6 / Chromobox protein homolog 6 / O95503 / Q9DBY5
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 29075042
Gene end: 29083114
  
Corresponding Affymetrix probe sets: Dr.23738.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000141694
Ensembl peptide - ENSDARP00000095582
NCBI entrez gene - 799294     See in Manteia.
RefSeq - NM_001003768
RefSeq Peptide - NP_001003768
swissprot - A0A0R4IZF4
swissprot - Q6AZW3
ZFIN ID - ZDB-GENE-040808-26
Ensembl - ENSDARG00000071051
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CBX6ENSGALG00000036867Gallus gallus
 CBX6ENSG00000183741Homo sapiens
 Cbx6ENSMUSG00000089715Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cbx6b / chromobox homolog 6b / CBX6* / Q9DBY5* / O95503* / chromobox 6* / Chromobox protein homolog 6 *ENSDARG0000009754347
cbx8a / chromobox homolog 8a (Pc class homolog, Drosophila) / CBX8* / Q9QXV1* / Q9HC52* / chromobox 8* / Chromobox protein homolog 8 *ENSDARG0000008732721
cbx8b / chromobox homolog 8b / CBX8* / Q9QXV1* / Q9HC52* / chromobox 8* / Chromobox protein homolog 8 *ENSDARG0000009877121
cbx4 / chromobox homolog 4 (Pc class homolog, Drosophila) / O55187* / O00257* / chromobox 4* / E3 SUMO-protein ligase CBX4 *ENSDARG0000009944118
cbx2 / chromobox homolog 2 (Drosophila Pc class) / Q14781* / P30658* / chromobox 2* / Chromobox protein homolog 2 *ENSDARG0000004493818
cbx7a / chromobox homolog 7a / CBX7* / Q8VDS3* / O95931* / chromobox 7* / Chromobox protein homolog 7 *ENSDARG0000003802516
cbx7b / chromobox homolog 7b / CBX7* / Q8VDS3* / O95931* / chromobox 7* / Chromobox protein homolog 7 *ENSDARG0000008718114


Protein motifs (from Interpro)
Interpro ID Name
 IPR000953  Chromo/chromo shadow domain
 IPR016197  Chromo-like domain superfamily
 IPR023779  Chromo domain, conserved site
 IPR023780  Chromo domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Oxidative Stress Induced Senescence
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
Regulation of PTEN gene transcription


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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