ENSDARG00000071235


Danio rerio

Features
Gene ID: ENSDARG00000071235
  
Biological name :si:ch211-117c9.5
  
Synonyms : si:ch211-117c9.5
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 6795531
Gene end: 6841245
  
Corresponding Affymetrix probe sets: Dr.16770.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124024
Ensembl peptide - ENSDARP00000086564
NCBI entrez gene - 100150452     See in Manteia.
RefSeq - XM_001922928
swissprot - F8W3V0
swissprot - E7EXM3
ZFIN ID - ZDB-GENE-110408-2
Ensembl - ENSDARG00000071235
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000041419Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc6a8 / solute carrier family 6 (neurotransmitter transporter), member 8 / Q8VBW1* / P48029* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, cr...ENSDARG0000004364665
SLC6A13 / solute carrier family 6 member 13 / Q9NSD5*ENSDARG0000006756750
slc6a6a / solute carrier family 6 (neurotransmitter transporter), member 6a / P31641* / SLC6A6* / O35316* / solute carrier family 6 member 6* / solute carrier family 6 (neurotransmitter tra...ENSDARG0000001253449
slc6a6b / solute carrier family 6 (neurotransmitter transporter), member 6b / P31641* / SLC6A6* / solute carrier family 6 member 6*ENSDARG0000009843848
slc6a22.2 / solute carrier family 6 member 22, tandem duplicate 2ENSDARG0000000135447
slc6a11b / solute carrier family 6 (neurotransmitter transporter), member 11b / P48066* / P31650* / SLC6A11* / solute carrier family 6 member 11* / Sodium- and chloride-dependent GABA transporter 3 *ENSDARG0000008798146
slc6a22.1 / solute carrier family 6 member 22, tandem duplicate 1ENSDARG0000000073046
slc6a1b / solute carrier family 6 (neurotransmitter transporter), member 1b / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000003964745
slc6a11a / solute carrier family 6 (neurotransmitter transporter), member 11aENSDARG0000007400244
slc6a1a / solute carrier family 6 (neurotransmitter transporter), member 1a / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000004594444
slc6a1l / solute carrier family 6 (neurotransmitter transporter, GABA), member 1, likeENSDARG0000004120543
si:ch211-132b12.6ENSDARG0000009454643
zgc:158427ENSDARG0000006837243
si:ch211-132b12.3ENSDARG0000006836342
si:ch211-132b12.1ENSDARG0000006148042
si:ch211-132b12.2ENSDARG0000009494642
slc6a2 / solute carrier family 6 (neurotransmitter transporter), member 2 / P23975* / O55192* / solute carrier family 6 member 2* / solute carrier family 6 (neurotransmitter transporter, no...ENSDARG0000001614138
slc6a5 / solute carrier family 6 (neurotransmitter transporter), member 5 / Q9Y345* / solute carrier family 6 member 5* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSDARG0000006796438
slc6a4a / solute carrier family 6 (neurotransmitter transporter), member 4a / Q60857* / SLC6A4* / P31645* / solute carrier family 6 member 4* / Sodium-dependent serotonin transporter *ENSDARG0000006116537
slc6a4b / solute carrier family 6 (neurotransmitter transporter), member 4bENSDARG0000005701737


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0015881 creatine transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005309 creatine:sodium symporter activity IBA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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