ENSDARG00000098438


Danio rerio

Features
Gene ID: ENSDARG00000098438
  
Biological name :slc6a6b
  
Synonyms : slc6a6b / solute carrier family 6 (neurotransmitter transporter), member 6b
  
Possible biological names infered from orthology : O35316 / P31641 / SLC6A6 / solute carrier family 6 member 6 / solute carrier family 6 (neurotransmitter transporter, taurine), member 6
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 31493953
Gene end: 31517300
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130106
swissprot - A0A0G2KCU6
ZFIN ID - ZDB-GENE-030131-3077
Ensembl - ENSDARG00000098438
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC6A6ENSGALG00000006425Gallus gallus
 P31641ENSG00000131389Homo sapiens
 O35316ENSMUSG00000030096Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc6a6a / solute carrier family 6 (neurotransmitter transporter), member 6a / P31641* / SLC6A6* / O35316* / solute carrier family 6 member 6* / solute carrier family 6 (neurotransmitter tra...ENSDARG0000001253490
SLC6A13 / solute carrier family 6 member 13 / Q9NSD5*ENSDARG0000006756762
slc6a11b / solute carrier family 6 (neurotransmitter transporter), member 11b / P48066* / P31650* / SLC6A11* / solute carrier family 6 member 11* / Sodium- and chloride-dependent GABA transporter 3 *ENSDARG0000008798160
slc6a8 / solute carrier family 6 (neurotransmitter transporter), member 8 / Q8VBW1* / P48029* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, cr...ENSDARG0000004364657
slc6a22.2 / solute carrier family 6 member 22, tandem duplicate 2ENSDARG0000000135457
slc6a11a / solute carrier family 6 (neurotransmitter transporter), member 11aENSDARG0000007400255
si:ch211-117c9.5ENSDARG0000007123555
slc6a22.1 / solute carrier family 6 member 22, tandem duplicate 1ENSDARG0000000073054
zgc:158427ENSDARG0000006837254
si:ch211-132b12.2ENSDARG0000009494653
si:ch211-132b12.1ENSDARG0000006148053
si:ch211-132b12.6ENSDARG0000009454653
slc6a1a / solute carrier family 6 (neurotransmitter transporter), member 1a / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000004594453
slc6a1b / solute carrier family 6 (neurotransmitter transporter), member 1b / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000003964752
si:ch211-132b12.3ENSDARG0000006836352
slc6a1l / solute carrier family 6 (neurotransmitter transporter, GABA), member 1, likeENSDARG0000004120549
slc6a5 / solute carrier family 6 (neurotransmitter transporter), member 5 / Q9Y345* / solute carrier family 6 member 5* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSDARG0000006796445
slc6a2 / solute carrier family 6 (neurotransmitter transporter), member 2 / P23975* / O55192* / solute carrier family 6 member 2* / solute carrier family 6 (neurotransmitter transporter, no...ENSDARG0000001614144
slc6a4b / solute carrier family 6 (neurotransmitter transporter), member 4bENSDARG0000005701742
slc6a3 / solute carrier family 6 (neurotransmitter transporter), member 3 / Q01959* / solute carrier family 6 member 3*ENSDARG0000000421941


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter
 IPR002434  Sodium:neurotransmitter symporter, taurine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IBA
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0015734 taurine transport IDA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0005369 taurine:sodium symporter activity IDA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Amino acid transport across the plasma membrane
Na+/Cl- dependent neurotransmitter transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain apoptotic , abnormal
Show

 ZFA:0000075 spinal cord spinal cord apoptotic , abnormal
Show

 ZFA:0001094 whole organism whole organism lethal (sensu genetics) , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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