ENSDARG00000004219


Danio rerio

Features
Gene ID: ENSDARG00000004219
  
Biological name :slc6a3
  
Synonyms : slc6a3 / solute carrier family 6 (neurotransmitter transporter), member 3
  
Possible biological names infered from orthology : Q01959 / Q61327 / Sodium-dependent dopamine transporter / solute carrier family 6 member 3
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 248239
Gene end: 263658
  
Corresponding Affymetrix probe sets: Dr.12382.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111850
swissprot - F1QGM4
ZFIN ID - ZDB-GENE-010316-1
Ensembl - ENSDARG00000004219
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q01959ENSG00000142319Homo sapiens
 Q61327ENSMUSG00000021609Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc6a2 / solute carrier family 6 (neurotransmitter transporter), member 2 / P23975* / O55192* / solute carrier family 6 member 2* / solute carrier family 6 (neurotransmitter transporter, no...ENSDARG0000001614163
slc6a4b / solute carrier family 6 (neurotransmitter transporter), member 4bENSDARG0000005701745
slc6a4a / solute carrier family 6 (neurotransmitter transporter), member 4a / Q60857* / SLC6A4* / P31645* / solute carrier family 6 member 4* / Sodium-dependent serotonin transporter *ENSDARG0000006116544
SLC6A13 / solute carrier family 6 member 13 / Q9NSD5*ENSDARG0000006756739
si:ch211-132b12.6ENSDARG0000009454638
slc6a8 / solute carrier family 6 (neurotransmitter transporter), member 8 / Q8VBW1* / P48029* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, cr...ENSDARG0000004364638
slc6a1a / solute carrier family 6 (neurotransmitter transporter), member 1a / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000004594438
slc6a6a / solute carrier family 6 (neurotransmitter transporter), member 6a / P31641* / SLC6A6* / O35316* / solute carrier family 6 member 6* / solute carrier family 6 (neurotransmitter tra...ENSDARG0000001253438
slc6a6b / solute carrier family 6 (neurotransmitter transporter), member 6b / P31641* / SLC6A6* / solute carrier family 6 member 6*ENSDARG0000009843838
slc6a1b / solute carrier family 6 (neurotransmitter transporter), member 1b / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000003964738
zgc:158225 / Q99884* / SLC6A7* / Q6PGE7* / solute carrier family 6 member 7* / Sodium-dependent proline transporter *ENSDARG0000003000637
slc6a11a / solute carrier family 6 (neurotransmitter transporter), member 11aENSDARG0000007400237
slc6a11b / solute carrier family 6 (neurotransmitter transporter), member 11b / P48066* / P31650* / SLC6A11* / solute carrier family 6 member 11* / Sodium- and chloride-dependent GABA transporter 3 *ENSDARG0000008798137
slc6a22.2 / solute carrier family 6 member 22, tandem duplicate 2ENSDARG0000000135437
slc6a5 / solute carrier family 6 (neurotransmitter transporter), member 5 / Q9Y345* / solute carrier family 6 member 5* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSDARG0000006796437
si:ch211-132b12.1ENSDARG0000006148037
slc6a1l / solute carrier family 6 (neurotransmitter transporter, GABA), member 1, likeENSDARG0000004120537
zgc:158427ENSDARG0000006837237
si:ch211-132b12.3ENSDARG0000006836337
si:ch211-117c9.5ENSDARG0000007123536


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Dopamine clearance from the synaptic cleft
Na+/Cl- dependent neurotransmitter transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr