ENSDARG00000094946


Danio rerio

Features
Gene ID: ENSDARG00000094946
  
Biological name :si:ch211-132b12.2
  
Synonyms : si:ch211-132b12.2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 40572294
Gene end: 40583104
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116846
NCBI entrez gene - 571877     See in Manteia.
RefSeq - NM_001045223
RefSeq Peptide - NP_001038688
swissprot - Q1LVJ0
ZFIN ID - ZDB-GENE-050420-178
Ensembl - ENSDARG00000094946
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:158427ENSDARG0000006837280
si:ch211-132b12.6ENSDARG0000009454679
si:ch211-132b12.1ENSDARG0000006148079
si:ch211-132b12.3ENSDARG0000006836379
slc6a22.1 / solute carrier family 6 member 22, tandem duplicate 1ENSDARG0000000073057
slc6a11a / solute carrier family 6 (neurotransmitter transporter), member 11aENSDARG0000007400257
slc6a22.2 / solute carrier family 6 member 22, tandem duplicate 2ENSDARG0000000135457
SLC6A13 / solute carrier family 6 member 13 / Q9NSD5*ENSDARG0000006756756
slc6a6a / solute carrier family 6 (neurotransmitter transporter), member 6a / P31641* / SLC6A6* / O35316* / solute carrier family 6 member 6* / solute carrier family 6 (neurotransmitter tra...ENSDARG0000001253454
slc6a11b / solute carrier family 6 (neurotransmitter transporter), member 11b / P48066* / P31650* / SLC6A11* / solute carrier family 6 member 11* / Sodium- and chloride-dependent GABA transporter 3 *ENSDARG0000008798153
slc6a6b / solute carrier family 6 (neurotransmitter transporter), member 6b / P31641* / SLC6A6* / solute carrier family 6 member 6*ENSDARG0000009843852
slc6a8 / solute carrier family 6 (neurotransmitter transporter), member 8 / Q8VBW1* / P48029* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, cr...ENSDARG0000004364648
si:ch211-117c9.5ENSDARG0000007123547
slc6a1l / solute carrier family 6 (neurotransmitter transporter, GABA), member 1, likeENSDARG0000004120547
slc6a1b / solute carrier family 6 (neurotransmitter transporter), member 1b / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000003964746
slc6a1a / solute carrier family 6 (neurotransmitter transporter), member 1a / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000004594446
slc6a2 / solute carrier family 6 (neurotransmitter transporter), member 2 / P23975* / O55192* / solute carrier family 6 member 2* / solute carrier family 6 (neurotransmitter transporter, no...ENSDARG0000001614141
slc6a5 / solute carrier family 6 (neurotransmitter transporter), member 5 / Q9Y345* / solute carrier family 6 member 5* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSDARG0000006796440
slc6a4b / solute carrier family 6 (neurotransmitter transporter), member 4bENSDARG0000005701740
slc6a4a / solute carrier family 6 (neurotransmitter transporter), member 4a / Q60857* / SLC6A4* / P31645* / solute carrier family 6 member 4* / Sodium-dependent serotonin transporter *ENSDARG0000006116539


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IBA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr