ENSDARG00000075389


Danio rerio

Features
Gene ID: ENSDARG00000075389
  
Biological name :si:ch211-281g13.4
  
Synonyms : si:ch211-281g13.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 49547045
Gene end: 49558223
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119542
NCBI entrez gene - 794323     See in Manteia.
RefSeq - NM_001145702
RefSeq Peptide - NP_001139174
swissprot - B8A4S5
ZFIN ID - ZDB-GENE-090311-16
Ensembl - ENSDARG00000075389
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000042001Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-281g13.5ENSDARG0000007405279
slc47a2.2 / solute carrier family 47 (multidrug and toxin extrusion), member 2.2ENSDARG0000007413677
HERC5 / si:ch73-190m4.1 / HERC6* / F2Z461* / Q9UII4* / Q8IVU3* / AC098582.1* / E3 ISG15--protein ligase Herc6 * / HECT and RLD domain containing E3 ubiquitin protein ligase 5* / HECT and RL...ENSDARG0000007578543
herc4 / HECT and RLD domain containing E3 ubiquitin protein ligase 4 / Q5GLZ8*ENSDARG0000005993636
herc3 / HECT and RLD domain containing E3 ubiquitin protein ligase 3 / Q15034*ENSDARG0000007588735
herc1 / HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 / Q15751*ENSDARG0000007790118
herc2 / HECT and RLD domain containing E3 ubiquitin protein ligase 2 / O95714* / Q4U2R1* / E3 ubiquitin-protein ligase HERC2 *ENSDARG0000007384118
hectd2 / HECT domain containing 2 / Q5U5R9* / Q8CDU6* / HECT domain E3 ubiquitin protein ligase 2* / Probable E3 ubiquitin-protein ligase HECTD2 *ENSDARG0000006119417
ube3a / ubiquitin protein ligase E3A / O08759* / Q05086*ENSDARG0000005573716
hectd3 / HECT domain containing 3 / Q3U487* / Q5T447* / E3 ubiquitin-protein ligase HECTD3 * / HECT domain E3 ubiquitin protein ligase 3*ENSDARG0000003890511
rccd1 / RCC1 domain containing 1ENSDARG000000710746
herc7 / hect domain and RLD 7ENSDARG000000989060


Protein motifs (from Interpro)
Interpro ID Name
 IPR000408  Regulator of chromosome condensation, RCC1
 IPR000569  HECT domain
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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