ENSDARG00000038905


Danio rerio

Features
Gene ID: ENSDARG00000038905
  
Biological name :hectd3
  
Synonyms : hectd3 / HECT domain containing 3
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase HECTD3 / HECT domain E3 ubiquitin protein ligase 3 / Q3U487 / Q5T447
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 26479676
Gene end: 26495044
  
Corresponding Affymetrix probe sets: Dr.4430.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116948
Ensembl peptide - ENSDARP00000056794
NCBI entrez gene - 563189     See in Manteia.
RefSeq - XM_009298548
RefSeq - NM_001077159
RefSeq Peptide - NP_001070627
swissprot - F1QF19
swissprot - F1Q5V5
ZFIN ID - ZDB-GENE-031118-179
Ensembl - ENSDARG00000038905
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000010203Gallus gallus
 ENSGALG00000010217Gallus gallus
 HECTD3ENSG00000126107Homo sapiens
 Hectd3ENSMUSG00000046861Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
herc2 / HECT and RLD domain containing E3 ubiquitin protein ligase 2 / O95714* / Q4U2R1* / E3 ubiquitin-protein ligase HERC2 *ENSDARG0000007384119
herc1 / HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 / Q15751*ENSDARG0000007790117
herc3 / HECT and RLD domain containing E3 ubiquitin protein ligase 3 / Q15034*ENSDARG0000007588716
herc4 / HECT and RLD domain containing E3 ubiquitin protein ligase 4 / Q5GLZ8*ENSDARG0000005993616
si:ch211-281g13.4ENSDARG0000007538913
slc47a2.2 / solute carrier family 47 (multidrug and toxin extrusion), member 2.2ENSDARG0000007413613
si:ch211-281g13.5ENSDARG0000007405213
HERC5 / si:ch73-190m4.1 / HERC6* / F2Z461* / Q9UII4* / Q8IVU3* / AC098582.1* / E3 ISG15--protein ligase Herc6 * / HECT and RLD domain containing E3 ubiquitin protein ligase 5* / HECT and RL...ENSDARG0000007578512
hectd2 / HECT domain containing 2 / Q5U5R9* / Q8CDU6* / HECT domain E3 ubiquitin protein ligase 2* / Probable E3 ubiquitin-protein ligase HECTD2 *ENSDARG0000006119412
ube3a / ubiquitin protein ligase E3A / O08759* / Q05086*ENSDARG0000005573712
rccd1 / RCC1 domain containing 1ENSDARG000000710744
herc7 / hect domain and RLD 7ENSDARG000000989060


Protein motifs (from Interpro)
Interpro ID Name
 IPR000569  HECT domain
 IPR004939  APC10/DOC domain
 IPR008979  Galactose-binding-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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