ENSDARG00000077516


Danio rerio

Features
Gene ID: ENSDARG00000077516
  
Biological name :recql4
  
Synonyms : RecQ helicase-like 4 / recql4
  
Possible biological names infered from orthology : RecQ like helicase 4
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 2752933
Gene end: 2822372
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000103321
Ensembl peptide - ENSDARP00000107555
NCBI entrez gene - 567383     See in Manteia.
swissprot - E7F2M7
swissprot - E7F8R0
ZFIN ID - ZDB-GENE-091112-2
Ensembl - ENSDARG00000077516
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RECQL4ENSG00000160957Homo sapiens
 Recql4ENSMUSG00000033762Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
blm / Bloom syndrome, RecQ helicase-like / P54132* / O88700* / Bloom syndrome protein homolog * / Bloom syndrome RecQ like helicase*ENSDARG0000007708913
wrn / Werner syndrome / O09053* / Q14191* / Werner syndrome RecQ like helicase*ENSDARG0000009821113
recql5 / RecQ helicase-like 5 / Q8VID5* / O94762* / RecQ like helicase 5* / ATP-dependent DNA helicase Q5 *ENSDARG0000005955611
recql / RecQ helicase-like / Q9Z129* / P46063* / RecQ protein-like* / RecQ like helicase*ENSDARG0000000717510


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR001878  Zinc finger, CCHC-type
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR021110  DNA replication/checkpoint protein
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination IBA
 biological_processGO:0006260 DNA replication IBA
 biological_processGO:0006284 base-excision repair IBA
 biological_processGO:0032508 DNA duplex unwinding IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005694 chromosome IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0009378 four-way junction helicase activity IBA
 molecular_functionGO:0043140 ATP-dependent 3"-5" DNA helicase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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