ENSG00000160957


Homo sapiens

Features
Gene ID: ENSG00000160957
  
Biological name :RECQL4
  
Synonyms : RECQL4 / RecQ like helicase 4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q24.3
Gene start: 144511288
Gene end: 144517845
  
Corresponding Affymetrix probe sets: 1553015_a_at (Human Genome U133 Plus 2.0 Array)   213520_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000477457
Ensembl peptide - ENSP00000476579
Ensembl peptide - ENSP00000477910
Ensembl peptide - ENSP00000483145
Ensembl peptide - ENSP00000482313
Ensembl peptide - ENSP00000476318
Ensembl peptide - ENSP00000476426
Ensembl peptide - ENSP00000476551
NCBI entrez gene - 9401     See in Manteia.
OMIM - 603780
RefSeq - XM_017014001
RefSeq - XM_017013992
RefSeq - XM_017013993
RefSeq - XM_017013994
RefSeq - XM_017013995
RefSeq - XM_017013996
RefSeq - XM_017013997
RefSeq - XM_017013998
RefSeq - XM_017013999
RefSeq - XM_017014000
RefSeq - NM_004260
RefSeq - XM_011517384
RefSeq - XM_017013991
RefSeq Peptide - NP_004251
swissprot - A0A087WZ30
swissprot - A0A087WTJ0
swissprot - V9GY28
swissprot - V9GY60
swissprot - V9GYA3
swissprot - V9GYB6
swissprot - A0A087X072
swissprot - V9GZ64
Ensembl - ENSG00000160957
  
Related genetic diseases (OMIM): 218600 - Baller-Gerold syndrome, 218600
  266280 - RAPADILINO syndrome, 266280
  268400 - Rothmund-Thomson syndrome, 268400
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 recql4ENSDARG00000077516Danio rerio
 Recql4ENSMUSG00000033762Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BLM / P54132 / Bloom syndrome RecQ like helicaseENSG0000019729917
WRN / Q14191 / Werner syndrome RecQ like helicaseENSG0000016539216
O94762 / RECQL5 / RecQ like helicase 5ENSG0000010846914
RECQL / P46063 / RecQ like helicaseENSG0000000470011


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR004589  DNA helicase, ATP-dependent, RecQ type
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR021110  DNA replication/checkpoint protein
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006310 DNA recombination IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008026 ATP-dependent helicase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000076 Vesicoureteral reflux "Abnormal (retrograde) movement of urine from the bladder into ureters or kidneys related to inadequacy of the valvular mechanism at the ureterovesicular junction or other causes." [HPO:curators]
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 HP:0000077 Abnormality of the kidneys "An abnormality of the kidneys, the paired organs whose primary function is the production of urine." [HPO:curators]
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 HP:0000126 Hydronephrosis 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000143 Rectovaginal fistula "The presence of a fistula between the rectum and the vagina." [HPO:curators]
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000193 Bifid uvula "A split or cleft uvula." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000238 Hydrocephalus 
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 HP:0000239 Large fontanelles "In newborns, the two frontal bones, two parietal bones, and one occipital bone are joined by fibrous sutures, which form a small posterior fontanelle, and a larger, diamond-shaped anterior fontanelle. These regions allow for the skull to pass the birth canal and for later growth. The fontanelles gradually ossify, whereby the posterior fontanelle usually closes by eight weeks and the anterior fontanelle by the 9th to 16th month of age. Large fontanelles are diagnosed if the fontanelles are larger than age-dependent norms." [HPO:curators]
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 HP:0000244 Brachyturricephaly 
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 HP:0000275 Narrow face 
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 HP:0000276 Long face 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000331 Small chin 
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 HP:0000337 Broad forehead "Abnormally large side-to-side distance of the forehead." [HPO:curators]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000405 Hearing loss, conductive 
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 HP:0000417 Slender nose 
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 HP:0000426 Prominent nasal bridge 
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000446 Narrow nasal bridge 
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 HP:0000452 Choanal stenosis "Abnormal narrowing of the choana (the posterior nasal aperture)." [HPO:curators]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000520 Proptosis 
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 HP:0000545 Myopia 
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 HP:0000561 Absent eyelashes "Lack of eyelashes." [HPO:curators]
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 HP:0000581 Blepharophimosis "Reduced width of the palpebral fissures." [HPO:sdoelken]
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 HP:0000601 Hypotelorism 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000685 Hypoplastic teeth 
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 HP:0000691 Microdontia 
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 HP:0000902 Rib fusion 
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0000992 Photosensitivity "An increased sensitivity of the skin to light. Photosensitivity may result in a rash upon exposure to the sun (which is known as photodermatosis). Photosensitivity can be diagnosed by phototests in which light is shone on small areas of skin." [HPO:curators]
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 HP:0001006 Hypotrichosis "Reduced or lacking hair growth." [HPO:curators]
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 HP:0001029 Poikiloderma 
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 HP:0001070 Mottled pigmentation 
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 HP:0001163 Abnormality of the metacarpal bones 
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 HP:0001180 Oligodactyly (hands) "A developmental defect resulting in the presence of fewer than the normal number of fingers." [HPO:curators]
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 HP:0001191 Abnormality of the carpal bones "An abnormality affecting the carpal bones of the wrist (scaphoid, lunate, triquetral, pisiform, trapezium, trapezoid, capitate, hamate)." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001373 Joint dislocation "Displacement or malalignment of joints." [HPO:curators]
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 HP:0001510 Growth retardation 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001531 Failure to thrive in infancy 
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 HP:0001545 Anteriorly placed anus "Anterior malposition of the anus." [HPO:curators]
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 HP:0001627 Cardiac abnormality "An abnormality of the `heart` (FMA:7088)." [HPO:probinson]
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 HP:0001671 Abnormality of the cardiac septa 
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 HP:0001875 Neutropenia 
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 HP:0001903 Anemia 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002014 Diarrhea 
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 HP:0002017 Nausea and vomiting 
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 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
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 HP:0002024 Malabsorption 
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 HP:0002126 Polymicrogyria "A congenital abnormality of the cerebral hemisphere characterized by an excessive number of small gyri (convolutions) on the surface of the brain." [HPO:curators]
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 HP:0002223 Absent eyebrows 
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 HP:0002299 Fine, brittle hair 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002652 Skeletal dysplasia 
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 HP:0002665 Lymphoma "A cancer originating in lymphocytes and presenting as a solid tumor of lymhpoid cells." [HPO:curators]
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 HP:0002669 Osteogenic sarcoma 
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 HP:0002671 Basal cell carcinoma 
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 HP:0002705 High, narrow palate "The presence of a high and narrow palate." [HPO:curators]
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 HP:0002860 Squamous cell carcinoma 
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 HP:0002863 Myelodysplasia 
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 HP:0002984 Hypoplasia of the radius "Underdevelopment of the radius." [HPO:curators]
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 HP:0002996 Limited elbow movement 
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 HP:0003022 Hypoplasia of the ulna "Underdevelopment of the ulna." [HPO:curators]
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 HP:0003031 Ulnar bowing "Bending of the diaphysis (shaft) of the ulna, usually in the convex posterior direction." [HPO:curators]
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 HP:0003065 Patellar hypoplasia "Underdevelopment of the patella." [HPO:curators]
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003298 Spina bifida occulta "The closed form of spina bifida." [HPO:curators]
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 HP:0003468 Abnormalities of the vertebrae 
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 HP:0003974 Absent ossification/absence of radius 
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 HP:0004231 Absent carpal bones/absent ossification of the carpal bones 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004425 Flattened forehead "An abnormally flat form of the forehead." [HPO:curators]
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 HP:0004440 Coronal craniosynostosis 
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 HP:0004442 Sagittal craniosynostosis 
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 HP:0004443 Lambdoidal craniosynostosis 
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 HP:0004871 Perineal fistula "The presence of a fistula (abnormal tunnel) between the bowel and the perineum (diamond-shaped region of the body between the pubic arch and the anus)." [HPO:curators]
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 HP:0005198 Stiff interphalangeal joints "Interphalangeal joint stiffness is a perceived sensation of tightness in the interphalangeal joints when attempting to move them after a period of inactivity." [HPO:curators]
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 HP:0005201 Anomalous splenoportal venous system 
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 HP:0005792 Humeral hypoplasia 
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 HP:0005886 Aphalangy, hands and feet 
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 HP:0006467 Limited shoulder movement "A limitation of the range of movement of the shoulder joint." [HPO:curators]
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 HP:0006487 Bowing of the long bones 
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 HP:0006498 Aplasia/Hypoplasia of the patella "Absence or underdevelopment of the patella." [HPO:curators]
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 HP:0006501 Aplasia/Hypoplasia of the radius "A small/hypoplastic or absent/aplastic radius." [HPO:curators]
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 HP:0007452 Midface capillary hemangioma 
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 HP:0007495 Prematurely aged appearance 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0009601 Aplasia/Hypoplasia of the thumb "Hypoplastic/small or absent thumb." [HPO:curators]
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 HP:0009702 Synostosis involving the carpal bones 
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 HP:0009777 Aplasia of the thumb "Absent thumb." [HPO:curators]
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 HP:0009778 Hypoplastic/small thumb 
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 HP:0010048 Aplasia of metacarpal bones 
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 HP:0011120 Saddle nose "A depression of the dorsum of the nose with loss of nasal tip support and definition, shortened (vertical) nasal length, overrotation of the nasal tip, and retrusion of the nasal spine and caudal septum." [HPO:probinson]
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 HP:0011318 Bicoronal synostosis "Synostosis affecting the right and the left coronal suture." [DDD:awilkie]
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0100542 Abnormal localization of kidneys 
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 HP:0100589 Urogenital fistula "The presence of a `fistula` (MPATH:70) affecting the `genitourinary system` (FMA:280610)." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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