ENSDARG00000077749


Danio rerio

Features
Gene ID: ENSDARG00000077749
  
Biological name :usp54b
  
Synonyms : ubiquitin specific peptidase 54b / usp54b
  
Possible biological names infered from orthology : Q70EL1 / Q8BL06 / ubiquitin specific peptidase 54 / USP54
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 26221999
Gene end: 26383242
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127217
Ensembl peptide - ENSDARP00000153345
NCBI entrez gene - 100535699     See in Manteia.
RefSeq - XM_021480333
swissprot - U3JAF0
ZFIN ID - ZDB-GENE-090828-3
Ensembl - ENSDARG00000077749
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 USP54ENSGALG00000005232Gallus gallus
 USP54ENSG00000166348Homo sapiens
 Usp54ENSMUSG00000034235Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usp54a / ubiquitin specific peptidase 54a / USP54* / Q70EL1* / Q8BL06* / ubiquitin specific peptidase 54*ENSDARG0000007794875
USP53 (1 of many) / ubiquitin specific peptidase 53 / USP53* / Q70EK8*ENSDARG0000007861532
usp53b / ubiquitin specific peptidase 53b / USP53* / P15975* / Q70EK8* / ubiquitin specific peptidase 53*ENSDARG0000007649931


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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