ENSGALG00000005232


Gallus gallus

Features
Gene ID: ENSGALG00000005232
  
Biological name :USP54
  
Synonyms : ubiquitin specific peptidase 54 / USP54
  
Possible biological names infered from orthology : Q70EL1 / Q8BL06
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 16079124
Gene end: 16128463
  
Corresponding Affymetrix probe sets: Gga.10065.1.S1_at (Chicken Array)   Gga.10065.1.S1_s_at (Chicken Array)   GgaAffx.26459.1.S1_s_at (Chicken Array)   GgaAffx.3275.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008393
NCBI entrez gene - 423746     See in Manteia.
RefSeq - XM_004942085
RefSeq - XM_004942086
RefSeq - XM_015288334
RefSeq - XM_015288335
RefSeq - XM_015288336
RefSeq - XM_015288337
RefSeq - XM_015288339
RefSeq - XM_004942084
swissprot - E1BU81
Ensembl - ENSGALG00000005232
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp54aENSDARG00000077948Danio rerio
 usp54bENSDARG00000077749Danio rerio
 USP54ENSG00000166348Homo sapiens
 Usp54ENSMUSG00000034235Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP53 / ubiquitin specific peptidase 53 / P15975* / Q70EK8*ENSGALG0000001199018


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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