ENSG00000166348


Homo sapiens

Features
Gene ID: ENSG00000166348
  
Biological name :USP54
  
Synonyms : Q70EL1 / ubiquitin specific peptidase 54 / USP54
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: q22.2
Gene start: 73497538
Gene end: 73625953
  
Corresponding Affymetrix probe sets: 227334_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000473466
Ensembl peptide - ENSP00000345216
Ensembl peptide - ENSP00000399972
Ensembl peptide - ENSP00000402435
Ensembl peptide - ENSP00000404644
Ensembl peptide - ENSP00000404710
Ensembl peptide - ENSP00000407245
Ensembl peptide - ENSP00000407368
NCBI entrez gene - 159195     See in Manteia.
RefSeq - XM_017015786
RefSeq - XM_017015777
RefSeq - XM_017015778
RefSeq - XM_017015779
RefSeq - XM_017015780
RefSeq - XM_017015781
RefSeq - XM_017015782
RefSeq - XM_017015783
RefSeq - XM_017015784
RefSeq - XM_017015785
RefSeq - NM_001320437
RefSeq - NM_152586
RefSeq - XM_005269582
RefSeq - XM_011539368
RefSeq - XM_017015759
RefSeq - XM_017015760
RefSeq - XM_017015761
RefSeq - XM_017015762
RefSeq - XM_017015763
RefSeq - XM_017015764
RefSeq - XM_017015765
RefSeq - XM_017015766
RefSeq - XM_017015767
RefSeq - XM_017015768
RefSeq - XM_017015769
RefSeq - XM_017015770
RefSeq - XM_017015771
RefSeq - XM_017015772
RefSeq - XM_017015773
RefSeq - XM_017015774
RefSeq - XM_017015775
RefSeq - XM_017015776
RefSeq Peptide - NP_001307366
RefSeq Peptide - NP_689799
swissprot - H7C1E9
swissprot - Q70EL1
swissprot - R4GN32
swissprot - X6RGF2
swissprot - H7C296
swissprot - X6RH50
swissprot - X6RHN7
Ensembl - ENSG00000166348
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp54aENSDARG00000077948Danio rerio
 usp54bENSDARG00000077749Danio rerio
 USP54ENSGALG00000005232Gallus gallus
 Usp54ENSMUSG00000034235Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP53 / Q70EK8 / ubiquitin specific peptidase 53ENSG0000014539019


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr