ENSMUSG00000034235


Mus musculus

Features
Gene ID: ENSMUSG00000034235
  
Biological name :Usp54
  
Synonyms : Q8BL06 / ubiquitin specific peptidase 54 / Usp54
  
Possible biological names infered from orthology : Q70EL1
  
Species: Mus musculus
  
Chr. number: 14
Strand: -1
Band: A3
Gene start: 20548912
Gene end: 20641063
  
Corresponding Affymetrix probe sets: 10417912 (MoGene1.0st)   10417920 (MoGene1.0st)   1428731_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000022356
Ensembl peptide - ENSMUSP00000036214
Ensembl peptide - ENSMUSP00000117503
NCBI entrez gene - 78787     See in Manteia.
MGI - MGI:1926037
RefSeq - XM_017316224
RefSeq - NM_030180
RefSeq - XM_011245225
RefSeq - XM_011245226
RefSeq - XM_011245227
RefSeq - XM_006519703
RefSeq - XM_006519705
RefSeq Peptide - NP_084456
swissprot - Q8BL06
swissprot - F6ZXV1
Ensembl - ENSMUSG00000034235
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp54aENSDARG00000077948Danio rerio
 usp54bENSDARG00000077749Danio rerio
 USP54ENSGALG00000005232Gallus gallus
 USP54ENSG00000166348Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Usp53 / P15975 / ubiquitin specific peptidase 53 / Q70EK8*ENSMUSG0000003970120


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0016579 protein deubiquitination IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000274 enlarged heart "increase over normal size of the heart" [J:29971]
Show

Allelic Composition: Usp3tm1b(EUCOMM)Wtsi/Usp3tm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Usp3tm1b(EUCOMM)Wtsi/Wtsi

 MP:0002874 decreased hemoglobin content "decrease in the total hemoglobin content in the circulating blood" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Usp3tm1b(EUCOMM)Wtsi/Usp3tm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Usp3tm1b(EUCOMM)Wtsi/Wtsi

 MP:0005419 hypoalbuminemia "blood albumin concentration below the normal range" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Usp3tm1b(EUCOMM)Wtsi/Usp3tm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Usp3tm1b(EUCOMM)Wtsi/Wtsi

 MP:0005567 decreased circulating total protein level "less than the average total concentration of these macromolecules in the blood " [RGD:Rat Genome Database submission]
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Allelic Composition: Usp3tm1b(EUCOMM)Wtsi/Usp3tm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Usp3tm1b(EUCOMM)Wtsi/Wtsi

 MP:0010088 decreased circulating fructosamine level "decrease in the concentration in the blood of total non enzymatic glycated proteins in the blood" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Usp3tm1b(EUCOMM)Wtsi/Usp3tm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Usp3tm1b(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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