ENSDARG00000079570


Danio rerio

Features
Gene ID: ENSDARG00000079570
  
Biological name :rspo2
  
Synonyms : rspo2 / R-spondin 2
  
Possible biological names infered from orthology : Mus musculus R-spondin 2 (Rspo2), transcript variant 1, mRNA. / Q6UXX9 / Q8BFU0
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 38453876
Gene end: 38553721
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100941
Ensembl peptide - ENSDARP00000123090
NCBI entrez gene - 566054     See in Manteia.
swissprot - F1Q5C9
swissprot - F1QG95
ZFIN ID - ZDB-GENE-060503-667
Ensembl - ENSDARG00000079570
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RSPO2ENSGALG00000030030Gallus gallus
 RSPO2ENSG00000147655Homo sapiens
 Rspo2ENSMUSG00000051920Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rspo3 / R-spondin 3 / Q2TJ95* / Q9BXY4*ENSDARG0000007008140
rspo1 / Q6DHR0 / R-spondin 1 / Q2MKA7*ENSDARG0000010434038
rspo4 / R-spondin 4 / Q2I0M5* / Q8BJ73*ENSDARG0000003859335


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR006212  Furin-like repeat
 IPR009030  Growth factor receptor cysteine-rich domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IMP
 biological_processGO:0033335 anal fin development IMP
 biological_processGO:0033336 caudal fin development IMP
 biological_processGO:0033337 dorsal fin development IMP
 biological_processGO:0033338 medial fin development IMP
 biological_processGO:0033339 pectoral fin development IMP
 biological_processGO:0033340 pelvic fin development IMP


Pathways (from Reactome)
Pathway description
Regulation of FZD by ubiquitination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000040 median fin fold median fin fold degenerate , abnormal
median fin fold decreased height , abnormal
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 ZFA:0000250 opercle opercle decreased size , abnormal
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 ZFA:0000519 hemal arch hemal arch hypoplastic , abnormal
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 ZFA:0000538 rib rib hypoplastic , abnormal
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 ZFA:0000623 basipterygium basipterygium hypoplastic , abnormal
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 ZFA:0001066 neural arch neural arch hypoplastic , abnormal
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 ZFA:0001161 pectoral fin pectoral fin decreased size , abnormal
pectoral fin absent , abnormal
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 ZFA:0001162 anal fin anal fin absent , abnormal
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 ZFA:0001173 dorsal fin dorsal fin absent , abnormal
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 ZFA:0001418 dorsal fin lepidotrichium dorsal fin lepidotrichium absent , abnormal
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 ZFA:0001421 anal fin lepidotrichium anal fin lepidotrichium decreased amount , abnormal
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 ZFA:0001456 pectoral fin endoskeletal disc pectoral fin endoskeletal disc decreased size , abnormal
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 ZFA:0001550 caudal fin lepidotrichium caudal fin lepidotrichium decreased amount , abnormal
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 ZFA:0001551 pectoral fin lepidotrichium pectoral fin lepidotrichium aplastic , abnormal
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 ZFA:0001552 pelvic fin lepidotrichium pelvic fin lepidotrichium hypoplastic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000060542 lgr4 / E7FE13 / leucine-rich repeat containing G protein-coupled receptor 4 / A2ARI4* / Q9BXB1*  / complex / reaction






 

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