ENSDARG00000086678


Danio rerio

Features
Gene ID: ENSDARG00000086678
  
Biological name :ascc3
  
Synonyms : activating signal cointegrator 1 complex subunit 3 / ascc3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 1504280
Gene end: 1757521
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106925
Ensembl peptide - ENSDARP00000133266
swissprot - E7FCJ6
swissprot - X1WFX7
ZFIN ID - ZDB-GENE-130214-2
Ensembl - ENSDARG00000086678
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snrnp200 / small nuclear ribonucleoprotein 200 (U5) / Q6P4T2* / O75643* / small nuclear ribonucleoprotein U5 subunit 200* / U5 small nuclear ribonucleoprotein 200 kDa helicase *ENSDARG0000007753640
polq / polymerase (DNA directed), theta / O75417* / Q8CGS6* / DNA polymerase theta*ENSDARG0000004462211
helq / helicase, POLQ like / Q2VPA6* / Q8TDG4*ENSDARG000000798188
poln / polymerase (DNA directed) nu / Q7Z5Q5* / DNA polymerase N* / DNA polymerase nu*ENSDARG000001039614


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR001650  Helicase, C-terminal
 IPR003593  AAA+ ATPase domain
 IPR004179  Sec63 domain
 IPR011545  DEAD/DEAH box helicase domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr