ENSDARG00000103961


Danio rerio

Features
Gene ID: ENSDARG00000103961
  
Biological name :poln
  
Synonyms : poln / polymerase (DNA directed) nu
  
Possible biological names infered from orthology : DNA polymerase N / DNA polymerase nu / Q7Z5Q5
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 24391129
Gene end: 24453754
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000099211
NCBI entrez gene - 566857     See in Manteia.
RefSeq - NM_001100026
RefSeq Peptide - NP_001093496
swissprot - F1RDP8
ZFIN ID - ZDB-GENE-100917-1
Ensembl - ENSDARG00000103961
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POLNENSGALG00000015692Gallus gallus
 POLNENSG00000130997Homo sapiens
 PolnENSMUSG00000045102Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
polq / polymerase (DNA directed), theta / O75417* / Q8CGS6* / DNA polymerase theta*ENSDARG0000004462220
snrnp200 / small nuclear ribonucleoprotein 200 (U5) / Q6P4T2* / O75643* / small nuclear ribonucleoprotein U5 subunit 200* / U5 small nuclear ribonucleoprotein 200 kDa helicase *ENSDARG000000775368
ascc3 / activating signal cointegrator 1 complex subunit 3ENSDARG000000866787
helq / helicase, POLQ like / Q2VPA6* / Q8TDG4*ENSDARG000000798184


Protein motifs (from Interpro)
Interpro ID Name
 IPR001098  DNA-directed DNA polymerase, family A, palm domain
 IPR002298  DNA polymerase A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006261 DNA-dependent DNA replication IBA
 biological_processGO:0019985 translesion synthesis IDA
 biological_processGO:0022616 DNA strand elongation IDA
 biological_processGO:0070987 error-free translesion synthesis IDA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0034061 DNA polymerase activity IDA


Pathways (from Reactome)
Pathway description
Fanconi Anemia Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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