ENSDARG00000087573


Danio rerio

Features
Gene ID: ENSDARG00000087573
  
Biological name :hdac11
  
Synonyms : hdac11 / histone deacetylase 11
  
Possible biological names infered from orthology : Q91WA3 / Q96DB2
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 27133560
Gene end: 27197452
  
Corresponding Affymetrix probe sets: Dr.14148.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000109681
Ensembl peptide - ENSDARP00000134194
NCBI entrez gene - 431718     See in Manteia.
RefSeq - NM_001002171
RefSeq Peptide - NP_001002171
swissprot - F1QED3
swissprot - A0A0R4IHP2
ZFIN ID - ZDB-GENE-040704-7
Ensembl - ENSDARG00000087573
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HDAC11ENSGALG00000005092Gallus gallus
 HDAC11ENSG00000163517Homo sapiens
 Hdac11ENSMUSG00000034245Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hdac12 / histone deacetylase 12ENSDARG0000010142227
hdac1 / histone deacetylase 1 / O09106* / Q13547* / Gm10093*ENSDARG0000001542722
hdac8 / histone deacetylase 8 / Q8VH37* / Q9BY41*ENSDARG0000000302122
hdac3 / histone deacetylase 3 / O15379*ENSDARG0000003751420


Protein motifs (from Interpro)
Interpro ID Name
 IPR000286  Histone deacetylase family
 IPR023801  Histone deacetylase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr