ENSDARG00000089302


Danio rerio

Features
Gene ID: ENSDARG00000089302
  
Biological name :hnrnpa0a
  
Synonyms : heterogeneous nuclear ribonucleoprotein A0a / hnrnpa0a
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein A0 / Heteroous nuclear ribonucleoprotein A0 / HNRNPA0 / Q13151 / Q9CX86
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 24277556
Gene end: 24279957
  
Corresponding Affymetrix probe sets: Dr.25764.1.A1_at (Zebrafish Array)   Dr.5122.1.S1_at (Zebrafish Array)   Dr.5122.1.S2_at (Zebrafish Array)   NM_212645_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000108912
NCBI entrez gene - 323529     See in Manteia.
RefSeq - NM_212645
RefSeq Peptide - NP_997810
swissprot - F1QS28
ZFIN ID - ZDB-GENE-030131-2249
Ensembl - ENSDARG00000089302
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HNRNPA0ENSGALG00000006160Gallus gallus
 Q13151ENSG00000177733Homo sapiens
 Q9CX86ENSMUSG00000007836Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hnrnpa0b / heterogeneous nuclear ribonucleoprotein A0b / Q9CX86* / Q13151* / HNRNPA0* / Heteroous nuclear ribonucleoprotein A0 * / heterogeneous nuclear ribonucleoprotein A0*ENSDARG0000003616282
hnrnpa0l / heterogeneous nuclear ribonucleoprotein A0, like / Q9CX86* / Q13151* / HNRNPA0* / Heteroous nuclear ribonucleoprotein A0 * / heterogeneous nuclear ribonucleoprotein A0*ENSDARG0000003616175
hnrnpa1b / heterogeneous nuclear ribonucleoprotein A1b / Q32P51* / P09651* / P49312* / HNRNPA1* / HNRNPA1L2* / HNRNPA1P48* / heterogeneous nuclear ribonucleoprotein A1* / heterogeneous nucl...ENSDARG0000003667555
hnrnpa1a / heterogeneous nuclear ribonucleoprotein A1a / Q32P51* / P09651* / HNRNPA1* / HNRNPA1L2* / HNRNPA1P48* / heterogeneous nuclear ribonucleoprotein A1* / heterogeneous nuclear ribonu...ENSDARG0000001102052
hnrnpa3 / heterogeneous nuclear ribonucleoprotein A3 / Gm9242* / Gm6793* / P51991* / Q8BG05* / Gm17190* / Heteroous nuclear ribonucleoprotein A3 *ENSDARG0000005935152


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034801  hnRNP A0, RNA recognition motif 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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