ENSMUSG00000007836


Mus musculus

Features
Gene ID: ENSMUSG00000007836
  
Biological name :Hnrnpa0
  
Synonyms : Heteroous nuclear ribonucleoprotein A0 / Hnrnpa0 / Q9CX86
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein A0 / Q13151
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: B1
Gene start: 58125879
Gene end: 58128556
  
Corresponding Affymetrix probe sets: 10409643 (MoGene1.0st)   1428407_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000007980
NCBI entrez gene - 77134     See in Manteia.
MGI - MGI:1924384
RefSeq - NM_029872
RefSeq Peptide - NP_084148
swissprot - Q9CX86
Ensembl - ENSMUSG00000007836
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpa0aENSDARG00000089302Danio rerio
 hnrnpa0bENSDARG00000036162Danio rerio
 hnrnpa0lENSDARG00000036161Danio rerio
 HNRNPA0ENSGALG00000006160Gallus gallus
 Q13151ENSG00000177733Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BG05 / Hnrnpa3 / Heteroous nuclear ribonucleoprotein A3 / P51991* / heterogeneous nuclear ribonucleoprotein A3*ENSMUSG0000005900560
Gm9242ENSMUSG0000009615660
Gm6793ENSMUSG0000009208659
P49312 / Hnrnpa1 / Heteroous nuclear ribonucleoprotein A1 Heteroous nuclear ribonucleoprotein A1, N-terminally processed / P09651* / heterogeneous nuclear ribonucleoprotein A1*ENSMUSG0000004643452
O88569 / Hnrnpa2b1 / Heteroous nuclear ribonucleoproteins A2/B1 / P22626* / heterogeneous nuclear ribonucleoprotein A2/B1*ENSMUSG0000000498051
Gm17190ENSMUSG0000009911542


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034801  hnRNP A0, RNA recognition motif 1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006954 inflammatory response IDA
 biological_processGO:0032496 response to lipopolysaccharide IDA
 biological_processGO:0070935 3"-UTR-mediated mRNA stabilization IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0017091 AU-rich element binding IEA
 molecular_functionGO:0019901 protein kinase binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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