ENSMUSG00000059005


Mus musculus

Features
Gene ID: ENSMUSG00000059005
  
Biological name :Hnrnpa3
  
Synonyms : Heteroous nuclear ribonucleoprotein A3 / Hnrnpa3 / Q8BG05
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein A3 / P51991
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: C3
Gene start: 75659261
Gene end: 75669407
  
Corresponding Affymetrix probe sets: 10344741 (MoGene1.0st)   10437222 (MoGene1.0st)   10473008 (MoGene1.0st)   10492045 (MoGene1.0st)   10503370 (MoGene1.0st)   10515113 (MoGene1.0st)   10528200 (MoGene1.0st)   10599972 (MoGene1.0st)   10600593 (MoGene1.0st)   1428262_s_at (Mouse Genome 430 2.0 Array)   1451184_at (Mouse Genome 430 2.0 Array)   1452712_at (Mouse Genome 430 2.0 Array)   1452774_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000116125
Ensembl peptide - ENSMUSP00000107595
Ensembl peptide - ENSMUSP00000126069
Ensembl peptide - ENSMUSP00000088298
Ensembl peptide - ENSMUSP00000107592
Ensembl peptide - ENSMUSP00000107593
NCBI entrez gene - 229279     See in Manteia.
MGI - MGI:1917171
RefSeq - XM_011239516
RefSeq - NM_053263
RefSeq - NM_146130
RefSeq - NM_198090
RefSeq Peptide - NP_666242
RefSeq Peptide - NP_932758
RefSeq Peptide - NP_444493
swissprot - Q5FB19
swissprot - A2AL12
swissprot - Q8BG05
swissprot - Q0VG47
swissprot - A2AL13
Ensembl - ENSMUSG00000059005
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpa3ENSDARG00000059351Danio rerio
 HNRNPA3ENSGALG00000009250Gallus gallus
 P51991ENSG00000170144Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm9242ENSMUSG0000009615694
Gm6793ENSMUSG0000009208692
P49312 / Hnrnpa1 / Heteroous nuclear ribonucleoprotein A1 Heteroous nuclear ribonucleoprotein A1, N-terminally processed / P09651* / heterogeneous nuclear ribonucleoprotein A1*ENSMUSG0000004643469
Gm17190ENSMUSG0000009911567
O88569 / Hnrnpa2b1 / Heteroous nuclear ribonucleoproteins A2/B1 / P22626* / heterogeneous nuclear ribonucleoprotein A2/B1*ENSMUSG0000000498066
Q9CX86 / Hnrnpa0 / Heteroous nuclear ribonucleoprotein A0 / Q13151* / heterogeneous nuclear ribonucleoprotein A0*ENSMUSG0000000783648


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR021662  Nuclear factor hnRNPA1
 IPR034513  hnRNP A3, RNA recognition motif 1
 IPR034516  hnRNP A3, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0035770 ribonucleoprotein granule IEA
 cellular_componentGO:0043005 neuron projection IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 cellular_componentGO:1990124 messenger ribonucleoprotein complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0051033 RNA transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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