ENSG00000170144


Homo sapiens

Features
Gene ID: ENSG00000170144
  
Biological name :HNRNPA3
  
Synonyms : heterogeneous nuclear ribonucleoprotein A3 / HNRNPA3 / P51991
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q31.2
Gene start: 177212563
Gene end: 177223958
  
Corresponding Affymetrix probe sets: 206809_s_at (Human Genome U133 Plus 2.0 Array)   211929_at (Human Genome U133 Plus 2.0 Array)   211930_at (Human Genome U133 Plus 2.0 Array)   211931_s_at (Human Genome U133 Plus 2.0 Array)   211932_at (Human Genome U133 Plus 2.0 Array)   211933_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000416340
Ensembl peptide - ENSP00000376309
Ensembl peptide - ENSP00000400688
Ensembl peptide - ENSP00000408487
NCBI entrez gene - 220988     See in Manteia.
OMIM - 605372
RefSeq - XM_017003588
RefSeq - NM_001330247
RefSeq - NM_194247
RefSeq - XM_005246380
RefSeq - XM_005246381
RefSeq - XM_006712365
RefSeq - XM_017003587
RefSeq Peptide - NP_001317176
RefSeq Peptide - NP_001317177
RefSeq Peptide - NP_001317178
RefSeq Peptide - NP_919223
swissprot - B4DDB6
swissprot - H7C1J8
swissprot - P51991
Ensembl - ENSG00000170144
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpa3ENSDARG00000059351Danio rerio
 HNRNPA3ENSGALG00000009250Gallus gallus
 Q8BG05ENSMUSG00000059005Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P09651 / HNRNPA1 / heterogeneous nuclear ribonucleoprotein A1ENSG0000013548669
P22626 / HNRNPA2B1 / heterogeneous nuclear ribonucleoprotein A2/B1ENSG0000012256668
Q32P51 / HNRNPA1L2 / heterogeneous nuclear ribonucleoprotein A1-like 2ENSG0000013967566
HNRNPA1P48 / heterogeneous nuclear ribonucleoprotein A1 pseudogene 48ENSG0000022457857
Q13151 / HNRNPA0 / heterogeneous nuclear ribonucleoprotein A0ENSG0000017773348


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR021662  Nuclear factor hnRNPA1
 IPR034513  hnRNP A3, RNA recognition motif 1
 IPR034516  hnRNP A3, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0016070 RNA metabolic process TAS
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0035770 ribonucleoprotein granule IEA
 cellular_componentGO:0043005 neuron projection IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IDA
 cellular_componentGO:1990124 messenger ribonucleoprotein complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0051033 RNA transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway
Processing of Capped Intron-Containing Pre-mRNA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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