ENSGALG00000009250


Gallus gallus

Features
Gene ID: ENSGALG00000009250
  
Biological name :HNRNPA3
  
Synonyms : heterogeneous nuclear ribonucleoprotein A3 / HNRNPA3
  
Possible biological names infered from orthology : Gm17190 / Gm6793 / Gm9242 / Heteroous nuclear ribonucleoprotein A3 / P51991 / Q8BG05
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 15889941
Gene end: 15901595
  
Corresponding Affymetrix probe sets: Gga.17619.1.S1_at (Chicken Array)   Gga.17805.1.S1_s_at (Chicken Array)   Gga.4575.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047258
Ensembl peptide - ENSGALP00000057666
Ensembl peptide - ENSGALP00000051605
Ensembl peptide - ENSGALP00000047909
Ensembl peptide - ENSGALP00000037924
NCBI entrez gene - 100859627     See in Manteia.
RefSeq - XM_015289584
RefSeq - XM_015289580
RefSeq - XM_015289581
RefSeq - XM_015289582
RefSeq - XM_015289583
RefSeq - XM_003641571
RefSeq - XM_004942715
RefSeq - XM_004942717
RefSeq - XM_015289576
RefSeq - XM_015289577
RefSeq - XM_015289578
RefSeq - XM_015289579
swissprot - E1BZE6
swissprot - A0A1D5PXH1
swissprot - A0A1D5P5E1
swissprot - A0A1D5P3K3
Ensembl - ENSGALG00000009250
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpa3ENSDARG00000059351Danio rerio
 P51991ENSG00000170144Homo sapiens
 Gm17190ENSMUSG00000099115Mus musculus
 Gm6793ENSMUSG00000092086Mus musculus
 Gm9242ENSMUSG00000096156Mus musculus
 Q8BG05ENSMUSG00000059005Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HNRNPA1 / Gallus gallus heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1), mRNA. / Q32P51* / P49312* / P09651* / HNRNPA1L2* / HNRNPA1P48* / heterogeneous nuclear ribonucleoprotein A1* / ...ENSGALG0000004201166
HNRNPA2B1 / heterogeneous nuclear ribonucleoprotein A2/B1 / O88569* / P22626* / Heteroous nuclear ribonucleoproteins A2/B1 *ENSGALG0000001103666
HNRNPA0 / heterogeneous nuclear ribonucleoprotein A0 / Q13151* / Q9CX86* / Heteroous nuclear ribonucleoprotein A0 *ENSGALG0000000616049


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR021662  Nuclear factor hnRNPA1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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