ENSGALG00000006160


Gallus gallus

Features
Gene ID: ENSGALG00000006160
  
Biological name :HNRNPA0
  
Synonyms : heterogeneous nuclear ribonucleoprotein A0 / HNRNPA0
  
Possible biological names infered from orthology : Heteroous nuclear ribonucleoprotein A0 / Q13151 / Q9CX86
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 14492166
Gene end: 14493089
  
Corresponding Affymetrix probe sets: Gga.6057.1.S1_at (Chicken Array)   GgaAffx.3847.1.A1_at (Chicken Array)   GgaAffx.3847.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009933
NCBI entrez gene - 416302     See in Manteia.
RefSeq - XM_414620
swissprot - F1NCI5
Ensembl - ENSGALG00000006160
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpa0aENSDARG00000089302Danio rerio
 hnrnpa0bENSDARG00000036162Danio rerio
 hnrnpa0lENSDARG00000036161Danio rerio
 Q13151ENSG00000177733Homo sapiens
 Q9CX86ENSMUSG00000007836Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HNRNPA3 / heterogeneous nuclear ribonucleoprotein A3 / Gm9242* / Gm6793* / P51991* / Q8BG05* / Gm17190* / Heteroous nuclear ribonucleoprotein A3 *ENSGALG0000000925061
HNRNPA1 / Gallus gallus heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1), mRNA. / Q32P51* / P49312* / P09651* / HNRNPA1L2* / HNRNPA1P48* / heterogeneous nuclear ribonucleoprotein A1* / ...ENSGALG0000004201152
HNRNPA2B1 / heterogeneous nuclear ribonucleoprotein A2/B1 / O88569* / P22626* / Heteroous nuclear ribonucleoproteins A2/B1 *ENSGALG0000001103652


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006954 inflammatory response IEA
 biological_processGO:0032496 response to lipopolysaccharide IEA
 biological_processGO:0070935 3"-UTR-mediated mRNA stabilization IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0017091 AU-rich element binding IEA
 molecular_functionGO:0019901 protein kinase binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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