ENSG00000122566


Homo sapiens

Features
Gene ID: ENSG00000122566
  
Biological name :HNRNPA2B1
  
Synonyms : heterogeneous nuclear ribonucleoprotein A2/B1 / HNRNPA2B1 / P22626
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: p15.2
Gene start: 26189927
Gene end: 26201529
  
Corresponding Affymetrix probe sets: 205292_s_at (Human Genome U133 Plus 2.0 Array)   225107_at (Human Genome U133 Plus 2.0 Array)   225932_s_at (Human Genome U133 Plus 2.0 Array)   244131_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000478691
Ensembl peptide - ENSP00000346694
Ensembl peptide - ENSP00000349101
Ensembl peptide - ENSP00000354021
NCBI entrez gene - 3181     See in Manteia.
OMIM - 600124
RefSeq - XM_017012110
RefSeq - NM_002137
RefSeq - NM_031243
RefSeq - XM_005249729
RefSeq - XM_017012109
RefSeq Peptide - NP_002128
RefSeq Peptide - NP_112533
swissprot - P22626
swissprot - A0A087WUI2
Ensembl - ENSG00000122566
  
Related genetic diseases (OMIM): 615422 - ?Inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 2, 615422
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HNRNPA2B1ENSGALG00000011036Gallus gallus
 O88569ENSMUSG00000004980Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P51991 / HNRNPA3 / heterogeneous nuclear ribonucleoprotein A3ENSG0000017014473
P09651 / HNRNPA1 / heterogeneous nuclear ribonucleoprotein A1ENSG0000013548662
Q32P51 / HNRNPA1L2 / heterogeneous nuclear ribonucleoprotein A1-like 2ENSG0000013967560
HNRNPA1P48 / heterogeneous nuclear ribonucleoprotein A1 pseudogene 48ENSG0000022457852
Q13151 / HNRNPA0 / heterogeneous nuclear ribonucleoprotein A0ENSG0000017773344


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034486  hnRNP A2/B1, RNA recognition motif 1
 IPR034489  hnRNP A2/B1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0016070 RNA metabolic process TAS
 biological_processGO:0031053 primary miRNA processing IDA
 biological_processGO:0035722 interleukin-12-mediated signaling pathway TAS
 biological_processGO:0044806 G-quadruplex DNA unwinding ISS
 biological_processGO:0048025 negative regulation of mRNA splicing, via spliceosome IEA
 biological_processGO:0050658 RNA transport IDA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:1904358 positive regulation of telomere maintenance via telomere lengthening ISS
 biological_processGO:1905663 positive regulation of telomerase RNA reverse transcriptase activity ISS
 biological_processGO:1990428 miRNA transport IDA
 cellular_componentGO:0000781 chromosome, telomeric region ISS
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005681 spliceosomal complex IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0015030 Cajal body ISS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016363 nuclear matrix ISS
 cellular_componentGO:0070062 extracellular exosome TAS
 cellular_componentGO:0071013 catalytic step 2 spliceosome IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0035198 miRNA binding IDA
 molecular_functionGO:0043047 single-stranded telomeric DNA binding IDA
 molecular_functionGO:0097157 pre-mRNA intronic binding IEA
 molecular_functionGO:0098505 G-rich strand telomeric DNA binding ISS
 molecular_functionGO:1990247 N6-methyladenosine-containing RNA binding IDA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway
Processing of Capped Intron-Containing Pre-mRNA
Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000708 Behavioural/Psychiatric Abnormality 
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 HP:0000924 Abnormality of the musculoskeletal system "An abnormality of the musculoskeletal system including one or more abnormalities affecting bones, muscles, cartilage, tendons, ligaments, joints, and other connective tissue." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001293 Cranial nerve compression 
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 HP:0001397 Hepatic steatosis 
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001638 Cardiomyopathy 
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 HP:0002145 Frontotemporal dementia 
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 HP:0002300 Mutism 
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 HP:0002380 Fasciculations "Fasciculations are observed as small, local, involuntary muscle contractions (twitching) visible under the skin. Fasciculations result from increased irritability of an axon (which in turn is often a manifestation of disease of a motor neuron). This leads to sporadic discharges of all the muscle fibers controlled by the axon in isolation from other motor units." [HPO:curators]
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 HP:0002381 Aphasia 
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 HP:0002442 Dyscalculia 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002463 Language impairment 
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 HP:0002493 Corticospinal tract dysfunction 
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 HP:0002515 Waddling gait 
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 HP:0002648 Abnormality of skull shape "An abnormality of the shape of the skull." [HPO:curators]
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 HP:0002756 Pathologic fracture "A pathologic fracture occurs when a bone breaks in an area that is weakened secondary to another disease process such as tumor, infection, and certain inherited bone disorders. A pathologic fracture can occur without a degree of trauma required to cause fracture in healthy bone." [HPO:curators]
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 HP:0002797 Osteolysis 
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 HP:0002839 Sphincter disturbances (bladder) 
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 HP:0003155 Elevated alkaline phosphatase "Abnormally increased serum levels of `alkaline phosphatase activity` (GO:0004035)." [HPO:probinson]
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 HP:0003198 Myopathy 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003307 Hyperlordosis 
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 HP:0003390 Sensory axonal neuropathy "An axonal neuropathy of peripheral sensory nerves." [HPO:curators]
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 HP:0003444 EMG shows chronic denervation 
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 HP:0003458 EMG myopathic abnormalities "The presence of abnormal electromyographic patterns indicative of myopathy, such as small-short polyphasic motor unit potentials." [HPO:curators]
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 HP:0003557 Increased variability in muscle fiber size "An abnormally high degree of muscle fiber size variation. This phenotypic feature can be observed upon muscle biopsy." [HPO:curators]
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 HP:0003560 Muscular dystrophy "The term dystrophy means abnormal growth. However, muscular dystrophy is used to describe primary myopathies with a genetic basis and a progressive course characterized by progressive skeletal muscle weakness, defects in muscle proteins, and the apoptosis of muscle cells." [HPO:curators]
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 HP:0003687 Centralized nuclei 
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 HP:0003700 Generalized amyotrophy "Generalized wasting of loss of muscle tissue." [HPO:curators]
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0003805 Rimmed vacuoles 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004347 Abnormal weakness of muscles of respiration 
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 HP:0004490 Calvarial hyperostosis "Excessive growth of the calvarial bone." [HPO:curators]
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 HP:0007002 Sensory and motor axonal neuropathy 
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 HP:0007354 Amyotrophic lateral sclerosis 
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 HP:0011314 Abnormality of long bone morphology "An abnormality of size or shape of the `long bones` (FMA:7474)." [HPO:probinson]
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 HP:0012083 Ubiquitin-positive cerebral inclusion bodies "Nuclear or cytoplasmic aggregates that show positive staining with antibodies against ubiquitin within cells of the brain." [HPO:probinson]
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 HP:0012444 Brain atrophy "Partial or complete wasting (loss) of brain tissue that was once present." [HPO:probinson]
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 HP:0012548 Skeletal muscle fatty infiltration "Deposition of fat within muscles." [HPO:probinson]
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 HP:0030838 Hip pain "An unpleasant sensation characterized by physical discomfort (such as pricking, throbbing, or aching) localized to the hip." [UToronto:chum]
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 HP:0100295 Muscle fiber atrophy 
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 HP:0100614 Myositis "A general term for inflammation of the muscles without respect to the underlying cause." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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