ENSMUSG00000004980


Mus musculus

Features
Gene ID: ENSMUSG00000004980
  
Biological name :Hnrnpa2b1
  
Synonyms : Heteroous nuclear ribonucleoproteins A2/B1 / Hnrnpa2b1 / O88569
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein A2/B1 / P22626
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: B3
Gene start: 51460932
Gene end: 51469894
  
Corresponding Affymetrix probe sets: 10544720 (MoGene1.0st)   1420365_a_at (Mouse Genome 430 2.0 Array)   1433829_a_at (Mouse Genome 430 2.0 Array)   1433830_at (Mouse Genome 430 2.0 Array)   1434047_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000145374
Ensembl peptide - ENSMUSP00000145383
Ensembl peptide - ENSMUSP00000067491
Ensembl peptide - ENSMUSP00000087453
Ensembl peptide - ENSMUSP00000110103
Ensembl peptide - ENSMUSP00000144736
Ensembl peptide - ENSMUSP00000145028
Ensembl peptide - ENSMUSP00000145245
NCBI entrez gene - 53379     See in Manteia.
MGI - MGI:104819
RefSeq - XM_006506373
RefSeq - NM_016806
RefSeq - NM_182650
RefSeq - XM_006506374
RefSeq Peptide - NP_058086
RefSeq Peptide - NP_872591
swissprot - O88569
swissprot - A0A0N4SUM2
Ensembl - ENSMUSG00000004980
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HNRNPA2B1ENSGALG00000011036Gallus gallus
 P22626ENSG00000122566Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BG05 / Hnrnpa3 / Heteroous nuclear ribonucleoprotein A3 / P51991* / heterogeneous nuclear ribonucleoprotein A3*ENSMUSG0000005900574
Gm9242ENSMUSG0000009615674
Gm6793ENSMUSG0000009208672
P49312 / Hnrnpa1 / Heteroous nuclear ribonucleoprotein A1 Heteroous nuclear ribonucleoprotein A1, N-terminally processed / P09651* / heterogeneous nuclear ribonucleoprotein A1*ENSMUSG0000004643464
Gm17190ENSMUSG0000009911553
Q9CX86 / Hnrnpa0 / Heteroous nuclear ribonucleoprotein A0 / Q13151* / heterogeneous nuclear ribonucleoprotein A0*ENSMUSG0000000783646


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR021662  Nuclear factor hnRNPA1
 IPR034486  hnRNP A2/B1, RNA recognition motif 1
 IPR034489  hnRNP A2/B1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IGI
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing ISO
 biological_processGO:0006406 mRNA export from nucleus ISS
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0031053 primary miRNA processing IEA
 biological_processGO:0048025 negative regulation of mRNA splicing, via spliceosome IMP
 biological_processGO:0050658 RNA transport IEA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:1990428 miRNA transport IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005681 spliceosomal complex ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0070062 extracellular exosome ISS
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding ISS
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0035198 miRNA binding IEA
 molecular_functionGO:0042802 identical protein binding ISO
 molecular_functionGO:0043047 single-stranded telomeric DNA binding IEA
 molecular_functionGO:0097157 pre-mRNA intronic binding IDA
 molecular_functionGO:1990247 N6-methyladenosine-containing RNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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