ENSDARG00000011020


Danio rerio

Features
Gene ID: ENSDARG00000011020
  
Biological name :hnrnpa1a
  
Synonyms : heterogeneous nuclear ribonucleoprotein A1a / hnrnpa1a
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein A1 / heterogeneous nuclear ribonucleoprotein A1-like 2 / heterogeneous nuclear ribonucleoprotein A1 pseudogene 48 / Heteroous nuclear ribonucleoprotein A1 Heteroous nuclear ribonucleoprotein A1, N-terminally processed / HNRNPA1 / HNRNPA1L2 / HNRNPA1P48 / P09651 / P49312 / Q32P51
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 2240075
Gene end: 2250767
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000024594
swissprot - E7FAQ8
ZFIN ID - ZDB-GENE-040426-1546
Ensembl - ENSDARG00000011020
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HNRNPA1ENSGALG00000042011Gallus gallus
 HNRNPA1P48ENSG00000224578Homo sapiens
 P09651ENSG00000135486Homo sapiens
 Q32P51ENSG00000139675Homo sapiens
 P49312ENSMUSG00000046434Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hnrnpa1b / heterogeneous nuclear ribonucleoprotein A1b / Q32P51* / P09651* / P49312* / HNRNPA1* / HNRNPA1L2* / HNRNPA1P48* / heterogeneous nuclear ribonucleoprotein A1* / heterogeneous nucl...ENSDARG0000003667576
hnrnpa3 / heterogeneous nuclear ribonucleoprotein A3 / Gm9242* / Gm6793* / P51991* / Q8BG05* / Gm17190* / Heteroous nuclear ribonucleoprotein A3 *ENSDARG0000005935160
hnrnpa0a / heterogeneous nuclear ribonucleoprotein A0a / Q9CX86* / Q13151* / HNRNPA0* / Heteroous nuclear ribonucleoprotein A0 * / heterogeneous nuclear ribonucleoprotein A0*ENSDARG0000008930241
hnrnpa0b / heterogeneous nuclear ribonucleoprotein A0b / Q9CX86* / Q13151* / HNRNPA0* / Heteroous nuclear ribonucleoprotein A0 * / heterogeneous nuclear ribonucleoprotein A0*ENSDARG0000003616241
hnrnpa0l / heterogeneous nuclear ribonucleoprotein A0, like / Q9CX86* / Q13151* / HNRNPA0* / Heteroous nuclear ribonucleoprotein A0 * / heterogeneous nuclear ribonucleoprotein A0*ENSDARG0000003616140


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
FGFR2 alternative splicing
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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