ENSDARG00000089844


Danio rerio

Features
Gene ID: ENSDARG00000089844
  
Biological name :scarb2c
  
Synonyms : scarb2c / scavenger receptor class B, member 2c
  
Possible biological names infered from orthology : Lysosome membrane protein 2 / O35114 / Q14108 / SCARB2 / scavenger receptor class B member 2
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 974555
Gene end: 989084
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000110098
swissprot - F1QSM7
ZFIN ID - ZDB-GENE-030131-5789
Ensembl - ENSDARG00000089844
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCARB2ENSGALG00000011499Gallus gallus
 Q14108ENSG00000138760Homo sapiens
 O35114ENSMUSG00000029426Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scarb2a / scavenger receptor class B, member 2aENSDARG0000009831248
cd36 / CD36 molecule (thrombospondin receptor) / P16671* / Q08857* / CD36 molecule* / Platelet glycoprotein 4 *ENSDARG0000003263938
scarb1 / scavenger receptor class B, member 1 / Q61009* / Q8WTV0*ENSDARG0000010155730


Protein motifs (from Interpro)
Interpro ID Name
 IPR002159  CD36 family
 IPR005429  Lysosome membrane protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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